RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OTOP2Q7RTS6 562 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 OR2A12Q8NGT7 310 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 IRF7Q92985 503 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 FBXL20Q96IG2 436 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 GORASP2Q9H8Y8 452 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 CEPT1Q9Y6K0 416 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 PLXNB3Q9ULL4 1909 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 RPL10P27635 214 aaKnown RBP28.23■■■□□ 2.11
SSBP3-204ENST00000371320 CAPGP40121 348 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 CHRNB3Q05901 458 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 PLEKHS1Q5SXH7 462 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 MSRB3Q8IXL7 192 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 SLC25A37Q9NYZ2 338 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 DEAF1O75398 565 aaPredicted RBP28.23■■■□□ 2.11
SSBP3-204ENST00000371320 MTX2O75431 263 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 SEC24DO94855 1032 aaPredicted RBP28.23■■■□□ 2.11
SSBP3-204ENST00000371320 TYRP14679 529 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 RPS14P62263 151 aaKnown RBP28.23■■■□□ 2.11
SSBP3-204ENST00000371320 TEAD2Q15562 447 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 PTCHD3Q3KNS1 767 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 GGTA1PQ4G0N0 100 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 IKZF5Q9H5V7 419 aa28.23■■■□□ 2.11
SSBP3-204ENST00000371320 BMP10O95393 424 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SLC6A12P48065 614 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 CYBRD1Q53TN4 286 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 RUNDC3AQ59EK9 446 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 BRAT1Q6PJG6 821 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 TBPL2Q6SJ96 375 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SERPINA13PQ6UXR4 307 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 ADIPOR2Q86V24 386 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 ZNF548Q8NEK5 533 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-204ENST00000371320 MYLIPQ8WY64 445 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 PYCR2Q96C36 320 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 UGT2B28Q9BY64 529 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 DLGAP4Q9Y2H0 992 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 TRIM43BA6NCK2 446 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 WASH3PC4AMC7 463 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SLC16A5O15375 505 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 CLIC3O95833 236 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 ZNF30P17039 623 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 CYP2A7P20853 494 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 NEK2P51955 445 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SP140Q13342 867 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SLC44A4Q53GD3 710 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SCAMP4Q969E2 229 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 TMIGD2Q96BF3 282 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 TRIM43Q96BQ3 446 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-204ENST00000371320 P2RY13Q9BPV8 354 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 LINC00597Q9H2U6 94 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 FAM83DQ9H4H8 585 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 NTN4Q9HB63 628 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 SPHK2Q9NRA0 654 aa28.22■■■□□ 2.11
SSBP3-204ENST00000371320 TUBA8Q9NY65 449 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-204ENST00000371320 MYOFQ9NZM1 2061 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 KCNE1BA0A087WTH5 132 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 A0A087WXM4 84 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 CFAP99D6REC4 459 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 GFYI3L273 518 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 KPNA5O15131 536 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 SNAP29O95721 258 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 CYP2A6P11509 494 aaPredicted RBP28.21■■■□□ 2.11
SSBP3-204ENST00000371320 CDH2P19022 906 aaPredicted RBP28.21■■■□□ 2.11
SSBP3-204ENST00000371320 CLDN8P56748 225 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 TMEM214Q6NUQ4 689 aaKnown RBP28.21■■■□□ 2.11
SSBP3-204ENST00000371320 MCOLN3Q8TDD5 553 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 TCF25Q9BQ70 676 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 TDP1Q9NUW8 608 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 ADGRE2Q9UHX3 823 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 INVSQ9Y283 1065 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 AP3M1Q9Y2T2 418 aa28.21■■■□□ 2.11
SSBP3-204ENST00000371320 ELOVL7A1L3X0 281 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 LINC00271P0C7V0 271 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 PCNAP12004 261 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 VIPR1P32241 457 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 DMC1Q14565 340 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 LRRC26Q2I0M4 334 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 OTUD3Q5T2D3 398 aaPredicted RBP28.2■■■□□ 2.11
SSBP3-204ENST00000371320 NEK5Q6P3R8 708 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 ELMSAN1Q6PJG2 1045 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 HSD11B1LQ7Z5J1 315 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 L3MBTL4Q8NA19 623 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 TBCDQ9BTW9 1192 aa28.2■■■□□ 2.11
SSBP3-204ENST00000371320 AREL1O15033 823 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 PRPS2P11908 318 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 DDX6P26196 483 aaKnown RBP eCLIP28.2■■■□□ 2.11e-6■■□□□ 12.6
SSBP3-204ENST00000371320 ABRAXAS1Q6UWZ7 409 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 PATL1Q86TB9 770 aaKnown RBP28.2■■■□□ 2.1
SSBP3-204ENST00000371320 OFCC1Q8IZS5 231 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 ZNF557Q8N988 423 aaPredicted RBP28.2■■■□□ 2.1
SSBP3-204ENST00000371320 DNAJB8Q8NHS0 232 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 FBXO30Q8TB52 745 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 ELMO1Q92556 727 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 HEPHQ9BQS7 1158 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 DNAJC11Q9NVH1 559 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 LIMD1Q9UGP4 676 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 SLC22A14Q9Y267 594 aa28.2■■■□□ 2.1
SSBP3-204ENST00000371320 UPK1AO00322 258 aa28.19■■■□□ 2.1
SSBP3-204ENST00000371320 S100A3P33764 101 aa28.19■■■□□ 2.1
SSBP3-204ENST00000371320 GTDC1Q4AE62 458 aa28.19■■■□□ 2.1
SSBP3-204ENST00000371320 PLPP6Q8IY26 295 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms