RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 FAR1Q8WVX9 515 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 PEBP4Q96S96 227 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 TPK1Q9H3S4 243 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 SLC32A1Q9H598 525 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 VPS29Q9UBQ0 182 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 GPC6Q9Y625 555 aaPredicted RBP19.27■□□□□ 0.68
LMO4-202ENST00000370544 SQORQ9Y6N5 450 aa19.27■□□□□ 0.68
LMO4-202ENST00000370544 PSMA1P25786 263 aaKnown RBP19.27■□□□□ 0.67
LMO4-202ENST00000370544 RNF19BQ6ZMZ0 732 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 PQLC3Q8N755 202 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 BORCS5Q969J3 196 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 ZNF347Q96SE7 839 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 AKTIPQ9H8T0 292 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 IL1RAPQ9NPH3 570 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 TAS2R1Q9NYW7 299 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 PHF11Q9UIL8 331 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 INSL5Q9Y5Q6 135 aa19.27■□□□□ 0.67
LMO4-202ENST00000370544 EDDM13A0A1B0GTR0 161 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PLOD3O60568 738 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 UBXN7O94888 489 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PRPS1L1P21108 318 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 HMGCS1Q01581 520 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 MSS51Q4VC12 460 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 TNFAIP8L2Q6P589 184 aaPredicted RBP19.26■□□□□ 0.67
LMO4-202ENST00000370544 SLC30A8Q8IWU4 369 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 LRRC17Q8N6Y2 441 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 SNX33Q8WV41 574 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 ART5Q96L15 291 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 TEX28O15482 410 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 AP2A2O94973 939 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PRAMEF14Q5SWL7 426 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PRAMEF13Q5VWM6 474 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 RFKQ969G6 155 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 SLC22A18Q96BI1 424 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 DNAJB9Q9UBS3 223 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 WASF2Q9Y6W5 498 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 CBSLP0DN79 551 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 CBSP35520 551 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 MAGEA11P43364 429 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 AQP4P55087 323 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 TAS1R3Q7RTX0 852 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 IFNLR1Q8IU57 520 aaPredicted RBP19.26■□□□□ 0.67
LMO4-202ENST00000370544 TDP1Q9NUW8 608 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 IL7RP16871 459 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 CRISP3P54108 245 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 ZNF33AQ06730 810 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 OLIG2Q13516 323 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 CAPSLQ8WWF8 208 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 DNAAF2Q9NVR5 837 aaKnown RBP19.26■□□□□ 0.67
LMO4-202ENST00000370544 PRDM4Q9UKN5 801 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 DGKBQ9Y6T7 804 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 RB1P06400 928 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 PRKCHP24723 683 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 RFC2P35250 354 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 EIPR1Q53HC9 387 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 CMTM8Q8IZV2 173 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 LRRC15Q8TF66 581 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 TSEN15Q8WW01 171 aaKnown RBP19.26■□□□□ 0.67
LMO4-202ENST00000370544 TAPBPLQ9BX59 468 aa19.26■□□□□ 0.67
LMO4-202ENST00000370544 ALPPL2P10696 532 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 SLC18A1P54219 525 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 AP1S2P56377 157 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 SCARB2Q14108 478 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ZNF311Q5JNZ3 666 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ATG14Q6ZNE5 492 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 HMGB4Q8WW32 186 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 KAT2AQ92830 837 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 OMA1Q96E52 524 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 PIWIL1Q96J94 861 aaKnown RBP19.25■□□□□ 0.67
LMO4-202ENST00000370544 COQ10BQ9H8M1 238 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 UPK3BL1B0FP48 263 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 UPK3BL2E5RIL1 263 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 STX16-NPEPL1H3BU86 382 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 STX16O14662 325 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 DLX3O60479 287 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ALPPP05187 535 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ZNF30P17039 623 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 PGDP52209 483 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 RBM20Q5T481 1227 aaKnown RBP19.25■□□□□ 0.67
LMO4-202ENST00000370544 ATCAYQ86WG3 371 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ZNF366Q8N895 744 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 OR5K1Q8NHB7 308 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 TRNT1Q96Q11 434 aaKnown RBP19.25■□□□□ 0.67
LMO4-202ENST00000370544 NODALQ96S42 347 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 PRORSD1PA6NEY8 169 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 NOBOXO60393 691 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 TEAD2Q15562 447 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 PDE12Q6L8Q7 609 aaKnown RBP19.25■□□□□ 0.67
LMO4-202ENST00000370544 LRRTM4Q86VH4 590 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 TSTD1Q8NFU3 115 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 NEK7Q8TDX7 302 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 GPR22Q99680 433 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 TLR9Q9NR96 1032 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 PDE10AQ9Y233 779 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 SDC2P34741 201 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 OXR1Q8N573 874 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 TRMT61BQ9BVS5 477 aaKnown RBP19.25■□□□□ 0.67
LMO4-202ENST00000370544 CLEC4AQ9UMR7 237 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms