RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TPST2O60704 377 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 G6PDP11413 515 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 CD72P21854 359 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 HLA-DQA1Q5Y7H0 255 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 AP2M1Q96CW1 435 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 KCTD7Q96MP8 289 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 ERMAPQ96PL5 475 aaPredicted RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 UCKL1Q9NWZ5 548 aa15.62■□□□□ 0.09
COL17A1-202ENST00000369733 KIAA1522Q9P206 1035 aaPredicted RBP15.62■□□□□ 0.09
COL17A1-202ENST00000369733 IQCMA0A1B0GVH7 501 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 BHMG1C9JSJ3 638 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ACSL4O60488 711 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ATG13O75143 517 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CCNDBP1O95273 360 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 TARDBPQ13148 414 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 BTG3Q14201 252 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PGBD2Q6P3X8 592 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 OR10Q1Q8NGQ4 319 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 TRUB1Q8WWH5 349 aaKnown RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PRICKLE1Q96MT3 831 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 FAIMQ9NVQ4 179 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 POFUT2Q9Y2G5 429 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MYH6P13533 1939 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 H3BM21 787 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SOCS2O14508 198 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 XPNPEP2O43895 674 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ITGB1P05556 798 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ATF6P18850 670 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 FPR1P21462 350 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 AP3S2P59780 193 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CSTF1Q05048 431 aaKnown RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 C1orf220Q5T0J3 134 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SLC30A2Q9BRI3 323 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 RICTORQ6R327 1708 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CDC7O00311 574 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 IRAK2O43187 625 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 NPPAP01160 153 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ELFN1P0C7U0 828 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CASP9P55211 416 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 OAFQ86UD1 273 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 C2CD4AQ8NCU7 369 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 AIF1LQ9BQI0 150 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 LMAN2LQ9H0V9 348 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MOCS1Q9NZB8 636 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 C8GP07360 202 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MAGEA8P43361 318 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MAPK9P45984 424 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SCARB2Q14108 478 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 BEND5Q7L4P6 421 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ANKFN1Q8N957 763 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SLC43A3Q8NBI5 491 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PJA1Q8NG27 643 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MOCOSQ96EN8 888 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 RDH12Q96NR8 316 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 S100A13Q99584 98 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 POLR2J3Q9H1A7 115 aaKnown RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PRELID1Q9Y255 219 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ABHD14A-ACY1A0A1B0GW23 586 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 TREHO43280 583 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 C7P10643 843 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CSTF2P33240 577 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 CLCN4P51793 760 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PPP2R2BQ00005 443 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SLC10A7Q0GE19 358 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 SMU1Q2TAY7 513 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ZDHHC14Q8IZN3 488 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 C2orf73Q8N5S3 287 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PIGXQ8TBF5 258 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ADAMTS15Q8TE58 950 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 PPP1R14AQ96A00 147 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 OSBPL2Q9H1P3 480 aa15.61■□□□□ 0.09
COL17A1-202ENST00000369733 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
COL17A1-202ENST00000369733 ISPDA4D126 451 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 FAM47E-STBD1D6RA91 191 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 SAGP10523 405 aaPredicted RBP15.6■□□□□ 0.09
COL17A1-202ENST00000369733 PRPS1L1P21108 318 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 PIGFQ07326 219 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 HFE2Q6ZVN8 426 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 SCAMP5Q8TAC9 235 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 KBTBD7Q8WVZ9 684 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 CDKN2AIPNLQ96HQ2 116 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 IL4I1Q96RQ9 567 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 SMOXQ9NWM0 555 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 FZD4Q9ULV1 537 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 DIRAS1O95057 198 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 S100A6P06703 90 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 CD247P20963 164 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 SULT2A1Q06520 285 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 GALNT2Q10471 571 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 PIGGQ5H8A4 983 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF613Q6PF04 617 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 COL21A1Q96P44 957 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 MMP27Q9H306 513 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 STYXL1Q9Y6J8 313 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 TRIM64CA6NLI5 447 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 OR4F3Q6IEY1 312 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 FERD3LQ96RJ6 166 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 RBM47A0AV96 593 aaKnown RBP15.6■□□□□ 0.09
COL17A1-202ENST00000369733 ZNF487B1APH4 448 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms