RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ZDHHC11BP0C7U3 371 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 GDI1P31150 447 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 GKP32189 559 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SPINT3P49223 89 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TEAD4Q15561 434 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PTCHD3Q3KNS1 767 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PLA2G4EQ3MJ16 856 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SPIN4Q56A73 249 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 COQ5Q5HYK3 327 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CGB2Q6NT52 195 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 KLHL35Q6PF15 583 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NAPRTQ6XQN6 538 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HACD2Q6Y1H2 254 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CLEC14AQ86T13 490 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ADCK1Q86TW2 530 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TMEM25Q86YD3 366 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HIPK1Q86Z02 1210 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SFRP1Q8N474 314 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 KDM1BQ8NB78 822 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 C11orf65Q8NCR3 313 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TTLQ8NG68 377 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HM13Q8TCT9 377 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 LINC01599Q8WXQ3 324 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HERVK_113Q902F9 699 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 RERGQ96A58 199 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ERLEC1Q96DZ1 483 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CDK15Q96Q40 435 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF607Q96SK3 696 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HPS4Q9NQG7 708 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TMEM30AQ9NV96 361 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 WDR70Q9NW82 654 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PTTG2Q9NZH5 202 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HCSTQ9UBK5 93 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SLCO3A1Q9UIG8 710 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 DMTF1Q9Y222 760 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NPC1O15118 1278 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TP73O15350 636 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CNOT3O75175 753 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NDUFS2O75306 463 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 RFPL2O75678 378 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ADH1BP00325 375 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 F11P03951 625 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 BPIP17213 487 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NELFEP18615 380 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 XRCC1P18887 633 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NDUFS1P28331 727 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CTGFP29279 349 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CMPK1P30085 196 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SERPINB1P30740 379 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 GJA8P48165 433 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MANFP55145 182 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CYP4F3Q08477 520 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 C2orf80Q0P641 193 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TMEM115Q12893 351 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HEPACAMQ14CZ8 416 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ITPRIPL2Q3MIP1 535 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 DENND5AQ6IQ26 1287 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MACC1Q6ZN28 852 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ADGRG6Q86SQ4 1221 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 RALGPS2Q86X27 583 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MICU2Q8IYU8 434 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PACRGLQ8N7B6 248 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 USP7Q93009 1102 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 FUBP1Q96AE4 644 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SORT1Q99523 831 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CDCA3Q99618 268 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CGREF1Q99674 301 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 RIBC2Q9H4K1 309 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CLK4Q9HAZ1 481 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SEMA3GQ9NS98 782 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ACTR3BQ9P1U1 418 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 IFT80Q9P2H3 777 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TEKT2Q9UIF3 430 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 FBXL21Q9UKT6 434 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC22A14Q9Y267 594 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 KIAA0100Q14667 2235 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MAGEB17A8MXT2 336 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 C9JVG2 144 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 E7ENX8 843 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 G3V2T6 193 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 MTX2O75431 263 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 POP7O75817 140 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 IGLV3-27P01718 113 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 OCM2P0CE71 109 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 OCMP0CE72 109 aaPredicted RBP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 MTHFRP42898 656 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 CCR10P46092 362 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 RHDQ02161 417 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 ILF3Q12906 894 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 TCEA2Q15560 299 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 OR4D1Q15615 310 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 SF1Q15637 639 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 PHKG1Q16816 387 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 C6orf136Q5SQH8 315 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 AFMIDQ63HM1 303 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 AGTRAPQ6RW13 159 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 CCDC81Q6ZN84 652 aa5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 ERN2Q76MJ5 926 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 THOC6Q86W42 341 aaKnown RBP5.19□□□□□ -1.58
SMNDC1-202ENST00000369603 CROCCP3Q8IVE0 287 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms