RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 WDR55Q9H6Y2 383 aaPredicted RBP4.61□□□□□ -1.67
CTSS-201ENST00000368985 TREX1Q9NSU2 369 aa4.61□□□□□ -1.67
CTSS-201ENST00000368985 NLE1Q9NVX2 485 aaPredicted RBP4.61□□□□□ -1.67
CTSS-201ENST00000368985 PLLPQ9Y342 182 aa4.61□□□□□ -1.67
CTSS-201ENST00000368985 C1QTNF9BB2RNN3 333 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 B4E171 279 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 GPC4O75487 556 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZWINTO95229 277 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 EPOP01588 193 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 CFIP05156 583 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 OR56A5P0C7T3 313 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 C1QTNF9P0C862 333 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SLC35E2BP0CK96 405 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 CD53P19397 219 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 HIST1H2ADP20671 130 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 MAP4P27816 1152 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 ALDH3A1P30838 453 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 VIPR1P32241 457 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TSPAN7P41732 249 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 GNPDA1P46926 289 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 RGS4P49798 205 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZNF140P52738 457 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 TMPRSS3P57727 454 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 INSM1Q01101 510 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 DLG1Q12959 904 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 GALNTL6Q49A17 601 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 KHDC1Q4VXA5 237 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 ACSBG2Q5FVE4 666 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SH2D4BQ5SQS7 431 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TMEM164Q5U3C3 297 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 LRRC8EQ6NSJ5 796 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 LIPIQ6XZB0 460 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 BPHLQ86WA6 291 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 FAM20CQ8IXL6 584 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 RBFAQ8N0V3 343 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 FBXO39Q8N4B4 442 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 KIF2BQ8N4N8 673 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZNF248Q8NDW4 579 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZFPM2Q8WW38 1151 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 MTBPQ96DY7 904 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 NSUN5Q96P11 429 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 H2AFJQ9BTM1 129 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TRIM55Q9BYV6 548 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 CHRNA10Q9GZZ6 450 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 EPN3Q9H201 632 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ASCL3Q9NQ33 180 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 DCDC2Q9UHG0 476 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 PACSIN3Q9UKS6 424 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 DOLKQ9UPQ8 538 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ASF1AQ9Y294 204 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 PLEKHM1Q9Y4G2 1056 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 UNC13CQ8NB66 2214 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ATXN2Q99700 1313 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 A0A1B0GVT2 93 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 PLIN3O60664 434 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 LTA4HP09960 611 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 MSL3P1P0C860 447 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SLC2A4P14672 509 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 EPHA3P29320 983 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 MAGEA6P43360 314 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SLC1A6P48664 564 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ARFIP2P53365 341 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 POU4F1Q01851 419 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZFP36L1Q07352 338 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 ASPHQ12797 758 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 LRP8Q14114 963 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 CCDC6Q16204 474 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SPDYAQ5MJ70 313 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZDHHC20Q5W0Z9 365 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ATG16L1Q676U5 607 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZNF549Q6P9A3 640 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SPATA21Q7Z572 469 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SNX20Q7Z614 316 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 GPSM1Q86YR5 675 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 POU5F2Q8N7G0 328 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 ARL10Q8N8L6 244 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 C2CD4AQ8NCU7 369 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 RFWD2Q8NHY2 731 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TTC9Q92623 222 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SEC16BQ96JE7 1060 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 SLC45A3Q96JT2 553 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TMEM74Q96NL1 305 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 IL17FQ96PD4 163 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 KCNA7Q96RP8 456 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 EFHD1Q9BUP0 239 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 LGR4Q9BXB1 951 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TEX101Q9BY14 249 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 TRIT1Q9H3H1 467 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 CARS2Q9HA77 564 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 MAGEE1Q9HCI5 957 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 MID1IP1Q9NPA3 183 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 MBNL1Q9NR56 388 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 KLHL3Q9UH77 587 aa4.6□□□□□ -1.67
CTSS-201ENST00000368985 EIF2B4Q9UI10 523 aaKnown RBP4.6□□□□□ -1.67
CTSS-201ENST00000368985 ATXN7L1Q9ULK2 861 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms