RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZNF470Q6ECI4 717 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 CDHR3Q6ZTQ4 885 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 KLHL7Q8IXQ5 586 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 LMNTD1Q8N9Z9 388 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 OR1L3Q8NH93 324 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 IL17FQ96PD4 163 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 CHRNA10Q9GZZ6 450 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 SYTL2Q9HCH5 934 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 FAM60AQ9NP50 221 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 CIDEBQ9UHD4 219 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 PADI1Q9ULC6 663 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 MAD1L1Q9Y6D9 718 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.31■□□□□ 0.522e-9■□□□□ 10
CKS1B-203ENST00000368439 H3BMH7 237 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 PFDN6O15212 129 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 HCRTR1O43613 425 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 KDM1AO60341 852 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 BANF1O75531 89 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 SCRG1O75711 98 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 C1orf105O95561 183 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 RPN2P04844 631 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 ATP5DP30049 168 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 DLSTP36957 453 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 SLC1A2P43004 574 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 CLCN7P51798 805 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 KIR2DS3Q14952 304 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 SLC5A12Q1EHB4 618 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 CCSMST1Q4G0I0 132 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 CRTC2Q53ET0 693 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 ZNF549Q6P9A3 640 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 ZNF517Q6ZMY9 492 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 SYDE1Q6ZW31 735 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 LMNTD2Q8IXW0 634 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 ZNF843Q8N446 348 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 C19orf47Q8N9M1 422 aaKnown RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 STARD8Q92502 1023 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 FAM136AQ96C01 138 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 PLAC1Q9HBJ0 212 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 FBXO6Q9NRD1 293 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 C20orf96Q9NUD7 363 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 RUVBL2Q9Y230 463 aaKnown RBP18.3■□□□□ 0.52
CKS1B-203ENST00000368439 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 PCDHB3Q9Y5E6 796 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 PCDHGA6Q9Y5G7 932 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 SEC16AO15027 2179 aa18.3■□□□□ 0.52
CKS1B-203ENST00000368439 A0A0J9YY10 115 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 EIF4E1BA6NMX2 242 aaKnown RBP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 TMEM150CB9EJG8 249 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 RASGRF2O14827 1237 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 TP73O15350 636 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 PRICKLE3O43900 615 aaPredicted RBP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 CPNE3O75131 537 aaKnown RBP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 MATN4O95460 622 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 CCNYL3P0C7X3 344 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 PGAM1P18669 254 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 CD9P21926 228 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 BDKRB1P46663 353 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 DR1Q01658 176 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 GPS2Q13227 327 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 THOC5Q13769 683 aaKnown RBP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 TMEM126BQ8IUX1 230 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 IGDCC3Q8IVU1 814 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 SPNS2Q8IVW8 549 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 OR2L8Q8NGY9 312 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 GIMAP7Q8NHV1 300 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 CT55Q8WUE5 264 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 LRFN5Q96NI6 719 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 RUNDC3BQ96NL0 473 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 SLC30A3Q99726 388 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 EBNA1BP2Q99848 306 aaKnown RBP18.29■□□□□ 0.52
CKS1B-203ENST00000368439 BOD1L1Q8NFC6 3051 aa18.29■□□□□ 0.52
CKS1B-203ENST00000368439 KRT87PA6NCN2 255 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 ISM1B1AKI9 464 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 CCDC188H7C350 402 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 TTI1O43156 1089 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 CHRM3P20309 590 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 OAS2P29728 719 aaKnown RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 RORAP35398 523 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 CDC20Q12834 499 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 CRYMQ14894 314 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 MORF4L2Q15014 288 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 ACSBG2Q5FVE4 666 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 ATP1A1-AS1Q5TC04 95 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 HIBCHQ6NVY1 386 aaPredicted RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 FAM199XQ6PEV8 388 aaPredicted RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 FAM20CQ8IXL6 584 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 C17orf53Q8N3J3 647 aaPredicted RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 ZBTB2Q8N680 514 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 DENND1AQ8TEH3 1009 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 RAD51AP1Q96B01 352 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 MED8Q96G25 268 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 TCTN2Q96GX1 697 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 PWWP2AQ96N64 755 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 RUFY1Q96T51 708 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 WDR83Q9BRX9 315 aaKnown RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 TRIM51Q9BSJ1 452 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms