RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CES3Q6UWW8 571 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 RAD9BQ6WBX8 426 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TMEFF1Q8IYR6 380 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 FNDC5Q8NAU1 212 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TCEAL4Q96EI5 215 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PRTFDC1Q9NRG1 225 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PIH1D1Q9NWS0 290 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 PISDQ9UG56 409 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 FETUBQ9UGM5 382 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 BLOC1S6Q9UL45 172 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 HCN2Q9UL51 889 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 DUSP10Q9Y6W6 482 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 LOXHD1Q8IVV2 1947 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 MCIDASD6RGH6 385 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 SNX4O95219 450 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 CPNE6O95741 557 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PAK4O96013 591 aaPredicted RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 GSNP06396 782 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 DCNP07585 359 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 PAICSP22234 425 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 ARCN1P48444 511 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 SMSP52788 366 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TUBB3Q13509 450 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 CHRNA6Q15825 494 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PTGR2Q8N8N7 351 aaPredicted RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 OR56A1Q8NGH5 318 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 SLC5A11Q8WWX8 675 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 ZUFSPQ96AP4 578 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ZNF354BQ96LW1 612 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 METTL7AQ9H8H3 244 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 EFCAB1Q9HAE3 211 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ADA2Q9NZK5 511 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 LRIT1Q9P2V4 623 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 MAN2B2Q9Y2E5 1009 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ZNF451Q9Y4E5 1061 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 A0A0G2JND7 137 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 EFCAB7A8K855 629 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 CRYABP02511 175 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 P2RY2P41231 377 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TNK2Q07912 1038 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 RANBP3LQ86VV4 465 aaPredicted RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 IRF2BP1Q8IU81 584 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PIK3C3Q8NEB9 887 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 FAR1Q8WVX9 515 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 C9orf72Q96LT7 481 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 MGME1Q9BQP7 344 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TBL1XR1Q9BZK7 514 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 ADNPQ9H2P0 1102 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 PALMDQ9NP74 551 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 IRGMA1A4Y4 181 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 WDR91A4D1P6 747 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TRIM3O75382 744 aaPredicted RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 IFNGP01579 166 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 RPLP0P05388 317 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 HLA-DQB2P05538 268 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TFEBP19484 476 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 CD70P32970 193 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 RAD23AP54725 363 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 CTBP2P56545 445 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 DCAF7P61962 342 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 C1DQ13901 141 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 CRYMQ14894 314 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 C9orf64Q5T6V5 341 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 IFI44Q8TCB0 444 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 VMP1Q96GC9 406 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 TACO1Q9BSH4 297 aaKnown RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 ERVMER34-1Q9H9K5 563 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 THAP1Q9NVV9 213 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 BOKQ9UMX3 212 aaPredicted RBP8.1□□□□□ -1.11
SSR2-202ENST00000368311 NDUFAF1Q9Y375 327 aa8.1□□□□□ -1.11
SSR2-202ENST00000368311 A0A1W2PPC4 97 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 ARHGEF33A8MVX0 844 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 HEXAP06865 529 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 ACRV1P26436 265 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 SPINT3P49223 89 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 MTTPP55157 894 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 CHI3L2Q15782 390 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 CPTPQ5TA50 214 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 NCBP2-AS2Q69YL0 99 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 GLB1L3Q8NCI6 653 aaPredicted RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 IMP4Q96G21 291 aaKnown RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 PRR11Q96HE9 360 aaPredicted RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 THUMPD3Q9BV44 507 aaKnown RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 IDSB3KWA1 339 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 CDC7O00311 574 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 F3P13726 295 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 IDO1P14902 403 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 MANFP55145 182 aaKnown RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 FRG1Q14331 258 aaKnown RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 PRKD1Q15139 912 aaPredicted RBP8.09□□□□□ -1.11
SSR2-202ENST00000368311 QPCTQ16769 361 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 SIRPB2Q5JXA9 342 aa8.09□□□□□ -1.11
SSR2-202ENST00000368311 ULK2Q8IYT8 1036 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms