RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 SORT1Q99523 831 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 LGMNQ99538 433 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 SH3GL3Q99963 347 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 MRPL57Q9BQC6 102 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 ACBD6Q9BR61 282 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 MED10Q9BTT4 135 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 MECRQ9BV79 373 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 B3GNT5Q9BYG0 378 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 EBF3Q9H4W6 596 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 WDCPQ9H6R7 721 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 SUDS3Q9H7L9 328 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 EFCAB1Q9HAE3 211 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 ARNT2Q9HBZ2 717 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 VCX3AQ9NNX9 186 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 CD93Q9NPY3 652 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 TCF7L2Q9NQB0 619 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 TMEM45AQ9NWC5 275 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 SYBUQ9NX95 663 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 NCKIPSDQ9NZQ3 722 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 TMEM216Q9P0N5 145 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 ARMCX1Q9P291 453 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 IPO11Q9UI26 975 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 RAB26Q9ULW5 256 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 PSMD13Q9UNM6 376 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 ACOT9Q9Y305 439 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 HEMK1Q9Y5R4 338 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 SLCO1B1Q9Y6L6 691 aa6.4□□□□□ -1.38
ECHDC1-202ENST00000368289 MYLKQ15746 1914 aa6.4□□□□□ -1.39
ECHDC1-202ENST00000368289 PLXND1Q9Y4D7 1925 aa6.4□□□□□ -1.39
ECHDC1-202ENST00000368289 DPPA5A6NC42 116 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CBX4O00257 560 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 DENRO43583 198 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CREB3O43889 395 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 SMIM24O75264 130 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 THP07101 528 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 RBP1P09455 135 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PDGFRBP09619 1106 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 LINGO3P0C6S8 592 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 ODC1P11926 461 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 COX4I1P13073 169 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 NCAM1P13591 858 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 UQCRBP14927 111 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 STMN1P16949 149 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 DRD1P21728 446 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 LMO2P25791 158 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 GJA4P35212 333 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PPARGP37231 505 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 ATP4BP51164 291 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CACNA2D1P54289 1103 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 TRAP1Q12931 704 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 KLF10Q13118 480 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 RUNX3Q13761 415 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CCDC157Q569K6 752 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 KIAA0930Q6ICG6 404 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 OR52E8Q6IFG1 317 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 KLC3Q6P597 504 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 FAM171BQ6P995 826 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 HACD2Q6Y1H2 254 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 ZC3HC1Q86WB0 502 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PDSS2Q86YH6 399 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PGAM4Q8N0Y7 254 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 THEM5Q8N1Q8 247 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PPHLN1Q8NEY8 458 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 BHLHE22Q8NFJ8 381 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CEP70Q8NHQ1 597 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 STYXQ8WUJ0 223 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 DTNBP1Q96EV8 351 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 VPS39Q96JC1 886 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CYP2S1Q96SQ9 504 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 IL12RB2Q99665 862 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 MAGEB5Q9BZ81 275 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 C20orf27Q9GZN8 174 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 RNF38Q9H0F5 515 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 MRPL46Q9H2W6 279 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 DPEP3Q9H4B8 488 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 COG4Q9H9E3 785 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PFDN4Q9NQP4 134 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 ABCC13Q9NSE7 274 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 OR12D3Q9UGF7 316 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 RIMKLBQ9ULI2 386 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 PADI4Q9UM07 663 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CDYLQ9Y232 598 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 POMPQ9Y244 141 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 CCL26Q9Y258 94 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 NME7Q9Y5B8 376 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 INSL5Q9Y5Q6 135 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 JMJD1CQ15652 2540 aa6.39□□□□□ -1.39
ECHDC1-202ENST00000368289 TDRD15B5MCY1 1934 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-202ENST00000368289 ARID1BQ8NFD5 2236 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-202ENST00000368289 MYOCOSA0A1B0GUC4 107 aa6.38□□□□□ -1.39
ECHDC1-202ENST00000368289 HEATR9A2RTY3 570 aa6.38□□□□□ -1.39
ECHDC1-202ENST00000368289 CASTOR2A6NHX0 329 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms