RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 THAP2Q9H0W7 228 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 PRKRIP1Q9H875 184 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 WSB2Q9NYS7 404 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 IL17BQ9UHF5 180 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF175Q9Y473 711 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 A0A1W2PQM1 296 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 H0YAE9 185 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 TRAFD1O14545 582 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 GAPDHSO14556 408 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 RENP00797 406 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 PCP11498 1178 aaKnown RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 MDKP21741 143 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 PGM1P36871 562 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 ELK3P41970 407 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 MAZP56270 477 aaKnown RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 LINC00315P59091 139 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 CKAP4Q07065 602 aaKnown RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 PRKG1Q13976 671 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 TAB1Q15750 504 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 TFDP3Q5H9I0 405 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 MARC1Q5VT66 337 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 ATG16L1Q676U5 607 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF776Q68DI1 518 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 C3P1Q6ZMU1 363 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 BBS12Q6ZW61 710 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 TMUB2Q71RG4 321 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 CATSPER3Q86XQ3 398 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 CEP97Q8IW35 865 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 C4orf32Q8N8J7 132 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 OR5T2Q8NGG2 359 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 OR10G7Q8NGN6 311 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 OR52N5Q8NH56 324 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 GSDMBQ8TAX9 411 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 TRPC4APQ8TEL6 797 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 PHLDA1Q8WV24 401 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 SPAG5Q96R06 1193 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 PAGR1Q9BTK6 254 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 MTMR10Q9NXD2 777 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 P4HTMQ9NXG6 502 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 RPS6KB2Q9UBS0 482 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF282Q9UDV7 671 aaPredicted RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 DBNLQ9UJU6 430 aaKnown RBP0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 HSF4Q9ULV5 492 aa0.7□□□□□ -2.3
RNU4-11P-201ENST00000365287 GON4LQ3T8J9 2241 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 A0A1W2PRG0 241 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 TMEM8BA6NDV4 472 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 G3V2L1 256 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 K7ENM7 598 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 RNASEH1O60930 286 aaKnown RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 CAND2O75155 1236 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 GIG44P09565 113 aaPredicted RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 HNRNPA2B1P22626 353 aaKnown RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 SLC6A6P31641 620 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 RPL34P49207 117 aaKnown RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ATP4BP51164 291 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 XGP55808 180 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 WNT4P56705 351 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 MECOMQ03112 1051 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 EBI3Q14213 229 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 SQLEQ14534 574 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 POSTNQ15063 836 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF146Q15072 292 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 NAB2Q15742 525 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ADIPOQQ15848 244 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF74Q16587 644 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 GRTP1Q5TC63 336 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 CCDC174Q6PII3 467 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 PAMR1Q6UXH9 720 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 SEPT14Q6ZU15 432 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 C17orf53Q8N3J3 647 aaPredicted RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 OR13C3Q8NGS6 347 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 RNF128Q8TEB7 428 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 APOBEC4Q8WW27 367 aaKnown RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 MTERF3Q96E29 417 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 SEPT5Q99719 369 aaPredicted RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 KIFC3Q9BVG8 833 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 NUP85Q9BW27 656 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 FAM49AQ9H0Q0 323 aaPredicted RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF701Q9NV72 531 aaPredicted RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 KCND2Q9NZV8 630 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF319Q9P2F9 582 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 TSPYL4Q9UJ04 414 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 KLK12Q9UKR0 248 aa0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 INTS6Q9UL03 887 aaKnown RBP0.69□□□□□ -2.3
RNU4-11P-201ENST00000365287 KLF18A0A0U1RQI7 1052 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 ABHD14A-ACY1A0A1B0GW23 586 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 ANKRD61A6NGH8 418 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 GJB3O75712 270 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 NXPH4O95158 308 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 WISP3O95389 354 aaPredicted RBP0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 TRUB2O95900 331 aaKnown RBP0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 PTPN3P26045 913 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 ABCD1P33897 745 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 FKBP3Q00688 224 aaKnown RBP0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 PNRC1Q12796 327 aaPredicted RBP0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 PLA2G7Q13093 441 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 SLC12A1Q13621 1099 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 CDH18Q13634 790 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 CAMK1Q14012 370 aa0.68□□□□□ -2.3
RNU4-11P-201ENST00000365287 FAM189A2Q15884 450 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms