RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CPOQ8IVL8 374 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 OR5T2Q8NGG2 359 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 OR52N5Q8NH56 324 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 C9orf43Q8TAL5 461 aaPredicted RBP1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 C11orf45Q8TAV5 145 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 BADQ92934 168 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 SMARCE1Q969G3 411 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 MOAP1Q96BY2 351 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 ZNF597Q96LX8 424 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 ISCA1Q9BUE6 129 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 SLC39A8Q9C0K1 460 aa1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 MTHFD2LQ9H903 347 aaPredicted RBP1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 WBP11Q9Y2W2 641 aaKnown RBP1.44□□□□□ -2.18
RNU6-238P-201ENST00000363313 TDRD6O60522 2096 aaKnown RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 ANKRD61A6NGH8 418 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 TCP11X1B4DZS4 312 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 TRAFD1O14545 582 aaPredicted RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SCAMP1O15126 338 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SH3BGRLO75368 114 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 LRCH4O75427 683 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 KRT33AO76009 404 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 C9P02748 559 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 HSD3B1P14060 373 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 PDHA2P29803 388 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 GGT5P36269 586 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SOX3P41225 446 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 PDX1P52945 283 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 RPL7AP62424 266 aaKnown RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 OLR1P78380 273 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 PNRC1Q12796 327 aaPredicted RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 MTF1Q14872 753 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 Q1RN00 199 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 PCGF3Q3KNV8 242 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 TTC31Q49AM3 519 aaPredicted RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 MAP9Q49MG5 647 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SPECC1Q5M775 1068 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 RARS2Q5T160 578 aaKnown RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 C3P1Q6ZMU1 363 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 TIPARPQ7Z3E1 657 aaKnown RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 ZER1Q7Z7L7 766 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SPICE1Q8N0Z3 855 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 TSPYL6Q8N831 410 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 CCT6BQ92526 530 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 NECTIN4Q96NY8 510 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 ADNPQ9H2P0 1102 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 SMC4Q9NTJ3 1288 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 PA2G4Q9UQ80 394 aaKnown RBP1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 CAMK2AQ9UQM7 478 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 NAALAD2Q9Y3Q0 740 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 LYVE1Q9Y5Y7 322 aa1.43□□□□□ -2.18
RNU6-238P-201ENST00000363313 RSPH10B2B2RC85 870 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 OGTO15294 1046 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 PHF1O43189 567 aaPredicted RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 F9P00740 461 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 RSPH10BP0C881 870 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 RARSP54136 660 aaKnown RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 RPS3AP61247 264 aaKnown RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 IRX4P78413 519 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 IGLV3-21P80748 117 aaPredicted RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 PLA2G7Q13093 441 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 RUNX3Q13761 415 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 TAB1Q15750 504 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 RNF130Q86XS8 419 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 OR13C3Q8NGS6 347 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 IRGQQ8WZA9 623 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 CEP295NLQ96MC4 621 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 SPAG5Q96R06 1193 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 BTBD10Q9BSF8 475 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 MTMR12Q9C0I1 747 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 THAP2Q9H0W7 228 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 JPT2Q9H910 190 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 P4HTMQ9NXG6 502 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 WSB2Q9NYS7 404 aaPredicted RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 THAP10Q9P2Z0 257 aaPredicted RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 AMACRQ9UHK6 382 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 MKLN1Q9UL63 735 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 R3HDM2Q9Y2K5 976 aaKnown RBP1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 PPP2R2CQ9Y2T4 447 aa1.42□□□□□ -2.18
RNU6-238P-201ENST00000363313 HIVEP2P31629 2446 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 POGZQ7Z3K3 1410 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 WI2-2373I1.2A0A1W2PRP0 233 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 OGG1O15527 345 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 PTGER4P35408 488 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 RPL34P49207 117 aaKnown RBP1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 FRG1Q14331 258 aaKnown RBP1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 ITPRIPL2Q3MIP1 535 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 TRIML1Q8N9V2 468 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 PAPD5Q8NDF8 572 aaKnown RBP1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 OR10G7Q8NGN6 311 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 MOSPD2Q8NHP6 518 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 APOBEC4Q8WW27 367 aaKnown RBP1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 NSMAFQ92636 917 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 INTS12Q96CB8 462 aaKnown RBP1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 RADILQ96JH8 1075 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 FAM81BQ96LP2 452 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 NUP85Q9BW27 656 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 OR2B2Q9GZK3 357 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 KCNMB3Q9NPA1 279 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 CLEC5AQ9NY25 188 aa1.41□□□□□ -2.18
RNU6-238P-201ENST00000363313 NME7Q9Y5B8 376 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms