RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 UNQ6126/PRO20091Q6UXV3 157 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CCDC91Q7Z6B0 441 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CCDC170Q8IYT3 715 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD13CQ8N6S4 541 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 BMPERQ8N8U9 685 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 GPATCH11Q8N954 259 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 NHLRC2Q8NBF2 726 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 NPEPL1Q8NDH3 523 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 OR13J1Q8NGT2 312 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 GRK7Q8WTQ7 553 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CCDC107Q8WV48 283 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 HEXDCQ8WVB3 486 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 NSMAFQ92636 917 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 HES6Q96HZ4 224 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 C17orf77Q96MU5 243 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 PARK7Q99497 189 aaKnown RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 RAD9AQ99638 391 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 LRRC1Q9BTT6 524 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 MRPL9Q9BYD2 267 aaKnown RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 LMAN1LQ9HAT1 526 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRPV4Q9HBA0 871 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CD93Q9NPY3 652 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 TCF7L2Q9NQB0 619 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 MALT1Q9UDY8 824 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 MTUS1Q9ULD2 1270 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 SAA2-SAA4A0A096LPE2 208 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 A0A1W2PS18 150 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TULP2O00295 520 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 SMAD6O43541 496 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 BAG2O95816 211 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 IGHV4-39P01824 125 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ALPLP05186 524 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 HAPLN1P10915 354 aaPredicted RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 HSD17B3P37058 310 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 IL15P40933 162 aaPredicted RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 WNT5AP41221 380 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 RGS7P49802 495 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 HTR6P50406 440 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ALDH3A2P51648 485 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 MFAP3P55082 362 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 RPS18P62269 152 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 CX3CL1P78423 397 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TNK1Q13470 666 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 MORF4L2Q15014 288 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC39A14Q15043 492 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 NPTX1Q15818 432 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF674Q2M3X9 581 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ASPRV1Q53RT3 343 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ELFN2Q5R3F8 820 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 STXBP5Q5T5C0 1151 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 IRAK1BP1Q5VVH5 260 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TXNRD3NBQ6F5E7 133 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 C11orf63Q6NUN7 778 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 GBP6Q6ZN66 633 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TMEM182Q6ZP80 229 aaPredicted RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TUBA1AQ71U36 451 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 C16orf82Q7Z2V1 217 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ARMC9Q7Z3E5 817 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ARHGAP22Q7Z5H3 698 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 RBM23Q86U06 439 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 HOOK3Q86VS8 718 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 DZIP1Q86YF9 867 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 UNC45BQ8IWX7 931 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 MSANTD4Q8NCY6 345 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 VANGL1Q8TAA9 524 aaPredicted RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 SCARB1Q8WTV0 552 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 IRGQQ8WZA9 623 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TUBA1CQ9BQE3 449 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 DDX31Q9H8H2 851 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 LRRC4Q9HBW1 653 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 APOBEC3GQ9HC16 384 aaKnown RBP3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 OLFML3Q9NRN5 406 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 GKN1Q9NS71 199 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 MTRRQ9UBK8 725 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 ITGA11Q9UKX5 1188 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRIM17Q9Y577 477 aa3.51□□□□□ -1.85
RNU6-28P-201ENST00000362378 A0A1W2PRB8 838 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 DUXAA6NLW8 204 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 CTSVO60911 334 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ATP6AP2O75787 350 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 PGLSO95336 258 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 SPP1P10451 314 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 EEF2P13639 858 aaKnown RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 SOAT1P35610 550 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ART1P52961 327 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 PITX1P78337 314 aaPredicted RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 MBTD1Q05BQ5 628 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 VEZF1Q14119 521 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 CDC37Q16543 378 aaPredicted RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 UGT3A2Q3SY77 523 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 MCMDC2Q4G0Z9 681 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 GLRA4Q5JXX5 417 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 PLBD1Q6P4A8 553 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF449Q6P9G9 518 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 NHLRC1Q6VVB1 395 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 KLHL7Q8IXQ5 586 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 C4orf19Q8IY42 314 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 CFAP206Q8IYR0 622 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms