RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ABCG4Q9H172 646 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 FANCFQ9NPI8 374 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TRIP11Q15643 1979 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 A8MUI8 341 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LTKP29376 864 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 CTBP2P56545 445 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 NXPE1Q8N323 547 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 OVCA2Q8WZ82 227 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 YTHDF1Q9BYJ9 559 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 MKKSQ9NPJ1 570 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 HEBP2Q9Y5Z4 205 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 A0A1W2PQ67 120 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LRRN3E7EW58 273 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 STMND1H3BQB6 276 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 CHMP24386 653 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ZC3H12AQ5D1E8 599 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 CMC1Q7Z7K0 106 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 FITM2Q8N6M3 262 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 GEMIN6Q8WXD5 167 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LRRN3Q9H3W5 708 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 RIMKLBQ9ULI2 386 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SHOX2O60902 331 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TRAM1Q15629 374 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 KIAA1324Q6UXG2 1013 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 PCDHB18PQ96TA0 734 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SULT4A1Q9BR01 284 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SLC5A7Q9GZV3 580 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 GSKIPQ9P0R6 139 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ITGA5P08648 1049 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ATP5A1P25705 553 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 GRIA2P42262 883 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF45Q02386 682 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TEX13DA0A0J9YY54 714 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 NKX6-1P78426 367 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 FAM174BQ3ZCQ3 159 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ANKDD1AQ495B1 522 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 CERS6Q6ZMG9 384 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF550Q7Z398 422 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 KIF18BQ86Y91 864 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TMED9Q9BVK6 235 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 OR51V1Q9H2C8 321 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 RIOX1Q9H6W3 641 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 MDFIC2A0A1B0GVS7 189 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 BANF1O75531 89 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 MPIP34949 423 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 OAZ1P54368 228 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 FAM182BQ5T319 152 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 GPR153Q6NV75 609 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 HCKP08631 526 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ARSJQ5FYB0 599 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LPGAT1Q92604 370 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 H7C417 338 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 EDNRAP25101 427 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 FCAMRQ8WWV6 532 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 PHPT1Q9NRX4 125 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM9Q9P0T7 183 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TMPRSS11EQ9UL52 423 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SLC19A2O60779 497 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 MPSTP25325 297 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 OR10A6Q8NH74 314 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF420Q8TAQ5 688 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 IDI2Q9BXS1 227 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 NOX1Q9Y5S8 564 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 CIB4A0PJX0 185 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 POU2F1P14859 743 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 PPP4CP60510 307 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LIX1Q8N485 282 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 YIPF7Q8N8F6 280 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SHKBP1Q8TBC3 707 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ELP5Q8TE02 316 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TXN2Q99757 166 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 POLR2J3Q9H1A7 115 aaKnown RBP9.13□□□□□ -0.95
VPS13A-203ENST00000360280 TBC1D14Q9P2M4 693 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 DLGAP1O14490 977 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CSDE1O75534 798 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SPAM1P38567 509 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF792Q3KQV3 632 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 IL23RQ5VWK5 629 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 GPR139Q6DWJ6 353 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 JAGN1Q8N5M9 183 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 A0A0J9YVX5 310 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ELOA3DA6NLF2 546 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 HMGN1P05114 100 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CDH1P12830 882 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 GLP1RP43220 463 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FSTL1Q12841 308 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ELOA3BQ3SY89 546 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ARL14Q8N4G2 192 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ELOA3Q8NG57 546 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FTHL17Q9BXU8 183 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TOR1AIP1Q5JTV8 583 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NCCRP1Q6ZVX7 275 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CYP4V2Q6ZWL3 525 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PRELID2Q8N945 189 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TTLQ8NG68 377 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms