RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MYOGP15173 224 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 KDELR1P24390 212 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PSMA2P25787 234 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 KRT20P35900 424 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 GGT5P36269 586 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TGFBR1P36897 503 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TNFSF9P41273 254 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SOX9P48436 509 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SLC7A2P52569 658 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PCBP4P57723 403 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 YBEYP58557 167 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 DEFA1P59665 94 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 DEFA3P59666 94 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 POLR2GP62487 172 aaKnown RBP eCLIP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 EMX1Q04741 257 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 DBPQ10586 325 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TCF15Q12870 199 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 EIF4EBP2Q13542 120 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MFSD13AQ14CX5 517 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TAF12Q16514 161 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MEP1AQ16819 746 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SOWAHAQ2M3V2 549 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PARP15Q460N3 678 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 OTUD3Q5T2D3 398 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 RAP1GAP2Q684P5 730 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 REP15Q6BDI9 236 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PNCKQ6P2M8 343 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CHST9Q7L1S5 443 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MON1AQ86VX9 555 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 P2RY8Q86VZ1 359 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PLD3Q8IV08 490 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 AQP12AQ8IXF9 295 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PLD6Q8N2A8 252 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 LILRB2Q8N423 598 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PARP16Q8N5Y8 322 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 GLB1L3Q8NCI6 653 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TRPV3Q8NET8 790 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 OR4M1Q8NGD0 313 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 BCL7CQ8WUZ0 217 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ANKRD49Q8WVL7 239 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ELMO1Q92556 727 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 WNT8BQ93098 351 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SIGLEC10Q96LC7 697 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CEP19Q96LK0 163 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MYRFLQ96LU7 910 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZNF300Q96RE9 604 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 NODALQ96S42 347 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 GAD1Q99259 594 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 EBNA1BP2Q99848 306 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 GATA5Q9BWX5 397 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 UCK2Q9BZX2 261 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MMP27Q9H306 513 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 IFT22Q9H7X7 185 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZNF556Q9HAH1 456 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZFP14Q9HCL3 533 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SNX15Q9NRS6 342 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 POLR3BQ9NW08 1133 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PAK1IP1Q9NWT1 392 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CCDC167Q9P0B6 97 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 EIF3KQ9UBQ5 218 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 OSGIN1Q9UJX0 560 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ADAM28Q9UKQ2 775 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TSPAN16Q9UKR8 245 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TMPRSS11EQ9UL52 423 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 SNX7Q9UNH6 387 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MAN2B2Q9Y2E5 1009 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PCDHB5Q9Y5E4 795 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 EYSQ5T1H1 3165 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZFC3H1O60293 1989 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PKD1L2Q7Z442 2459 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PRR23AA6NEV1 266 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ARL5CA6NH57 179 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 HMX3A6NHT5 357 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 KIAA1324LA8MWY0 1029 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 H0Y626 953 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 H3BMM5 538 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 M0R082 166 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 APOL1O14791 398 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PLD2O14939 933 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 TBC1D4O60343 1298 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CACNG3O60359 315 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 H2AFYO75367 372 aaKnown RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PIGNO95427 931 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CST3P01034 146 aaPredicted RBP3.91□□□□□ -1.78
CNGA1-201ENST00000358519 VTNP04004 478 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 C8AP07357 584 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 KRT19P08727 400 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZNF250P15622 560 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 PSMA3P25788 255 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 IL12RB1P42701 662 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 MAPK8P45983 427 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 HAAOP46952 286 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 NPY2RP49146 381 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 CXCR3P49682 368 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 GPR85P60893 370 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ROR1Q01973 937 aa3.91□□□□□ -1.78
CNGA1-201ENST00000358519 ZNF45Q02386 682 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms