RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 MSI1O43347 362 aaKnown RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 AMD1P17707 334 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 AKT2P31751 481 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 SCARB2Q14108 478 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 PABPC1LQ4VXU2 614 aaKnown RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 NCEH1Q6PIU2 408 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 AIF1LQ9BQI0 150 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 A0A0J9YVX5 310 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 TMEM233B4DJY2 109 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 VNN2O95498 520 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 RAB5BP61020 215 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 ZNF155Q12901 538 aaPredicted RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 CBX2Q14781 532 aaPredicted RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 C4orf32Q8N8J7 132 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 GLB1L3Q8NCI6 653 aaPredicted RBP18.83■□□□□ 0.61
BRPF3-202ENST00000357641 FBXL3Q9UKT7 428 aa18.83■□□□□ 0.61
BRPF3-202ENST00000357641 DGKEP52429 567 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 DSC2Q02487 901 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 RANBP3LQ86VV4 465 aaPredicted RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 CFAP52Q8N1V2 620 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 OR10G6Q8NH81 332 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 AP1S3Q96PC3 154 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 USP29Q9HBJ7 922 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 EBF1Q9UH73 591 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 POFUT2Q9Y2G5 429 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 RPH3AQ9Y2J0 694 aaPredicted RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 H0YJX3 145 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 VAMP1P23763 118 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 ACVR2AP27037 513 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 CRB2Q5IJ48 1285 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 JPH3Q8WXH2 748 aaPredicted RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 MMP27Q9H306 513 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 AKTIPQ9H8T0 292 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 B4GALT5O43286 388 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 BCAS2O75934 225 aaPredicted RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 TMEM63AO94886 807 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 HNRNPA0Q13151 305 aaKnown RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 CTC1Q2NKJ3 1217 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 KLHL35Q6PF15 583 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 SLC7A5P1Q8MH63 180 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 PYROXD2Q8N2H3 581 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 STYXQ8WUJ0 223 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 COL21A1Q96P44 957 aa18.83■□□□□ 0.6
BRPF3-202ENST00000357641 CCDC86Q9H6F5 360 aaKnown RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 RPF2Q9H7B2 306 aaKnown RBP18.83■□□□□ 0.6
BRPF3-202ENST00000357641 BTBD19C9JJ37 291 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ITGA10O75578 1167 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 F7P08709 466 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 CES1P23141 567 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 SLC3A1Q07837 685 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 CHIT1Q13231 466 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 OR2T5Q6IEZ7 315 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 OR2T29Q8NH02 315 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 SUSD6Q92537 303 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ZNF705EA8MWA4 302 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ADRA1BP35368 520 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 CACNG1Q06432 222 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TMEM44Q2T9K0 475 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 MED27Q6P2C8 311 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 FAXDC2Q96IV6 333 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 CDK15Q96Q40 435 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 NEMP2A6NFY4 417 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 FFAR2O15552 330 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 RASGRP1O95267 797 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 SLC1A2P43004 574 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 KCTD9Q7L273 389 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ANKRD13BQ86YJ7 626 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 OR6K6Q8NGW6 343 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 NANSQ9NR45 359 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 NKRFO15226 690 aaKnown RBP eCLIP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 MAP2K4P45985 399 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 NRG3P56975 720 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TAS2R39P59534 338 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ERVK-8P63133 956 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 PIGFQ07326 219 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 COL9A3Q14050 684 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 GFOD2Q3B7J2 385 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 BRMS1LQ5PSV4 323 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 COMMD7Q86VX2 200 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TOR1AIP2Q8NFQ8 470 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 SLC7A6OSQ96CW6 309 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TCEAL4Q96EI5 215 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 MIPEPQ99797 713 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TAS2R9Q9NYW1 312 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 ZDHHC2Q9UIJ5 367 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 EDNRAP25101 427 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 UGCGQ16739 394 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 TIGD4Q8IY51 512 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 AURKBQ96GD4 344 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 HSPA12BQ96MM6 686 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 RANBP3Q9H6Z4 567 aaPredicted RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 FARSBQ9NSD9 589 aaKnown RBP18.82■□□□□ 0.6
BRPF3-202ENST00000357641 HCN3Q9P1Z3 774 aa18.82■□□□□ 0.6
BRPF3-202ENST00000357641 OXSR1O95747 527 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms