RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 AMZ2Q86W34 360 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 C5orf34Q96MH7 638 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 NPY6RQ99463 290 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 CGREF1Q99674 301 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 EBF4Q9BQW3 602 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 CDADC1Q9BWV3 514 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 EQTNQ9NQ60 294 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PAK6Q9NQU5 681 aaPredicted RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 ACTR3BQ9P1U1 418 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 IKZF2Q9UKS7 526 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 CFL2Q9Y281 166 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 C10orf71Q711Q0 1435 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 WNT9AO14904 365 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 FAM189A1O60320 539 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 AP2A2O94973 939 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 ZCCHC12Q6PEW1 402 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PAQR3Q6TCH7 311 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 ADGRG6Q86SQ4 1221 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 METTL21AQ8WXB1 218 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 DERL2Q9GZP9 239 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 MRPS17Q9Y2R5 130 aaKnown RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 KIAA0100Q14667 2235 aaKnown RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 A0A1W2PQ72 361 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 LCHNA4D1U4 455 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PDCD5O14737 125 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 C9P02748 559 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CLCN4P51793 760 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 DNAJB13P59910 316 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ADNP2Q6IQ32 1131 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 OR4C6Q8NH72 309 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 UFD1Q92890 307 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PCYT2Q99447 389 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 EBF3Q9H4W6 596 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ANKRA2Q9H9E1 313 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ELL3Q9HB65 397 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 A0A1W2PRB8 838 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CCL22O00626 93 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PCDH7O60245 1069 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 MTRF1O75570 445 aaKnown RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 IGFBP4P22692 258 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 SP140Q13342 867 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FAM91A1Q658Y4 838 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 EPGNQ6UW88 154 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 OR14C36Q8NHC7 312 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 C15orf40Q8WUR7 153 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 EHD1Q9H4M9 534 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 C14orf105Q9NVL8 296 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FLRT1Q9NZU1 646 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 B3GALT2O43825 422 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PRAMEF12O95522 483 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 MPIP34949 423 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 NFKB2Q00653 900 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 IQCCQ4KMZ1 466 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 TMEM214Q6NUQ4 689 aaKnown RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 GALNT15Q8N3T1 639 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 DBF4BQ8NFT6 615 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 SLC28A3Q9HAS3 691 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CRYBG1Q9Y4K1 1723 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 MYH10P35580 1976 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 IRS2Q9Y4H2 1338 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 PRMT3O60678 531 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ECI2O75521 394 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CD2P06729 351 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FESP07332 822 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 VBP1P61758 197 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 TUBA4AP68366 448 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF460Q14592 562 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FRG2Q64ET8 278 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 USP30Q70CQ3 517 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CYS1Q717R9 158 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ERI1Q8IV48 349 aaKnown RBP11.51□□□□□ -0.57
COL9A1-202ENST00000357250 OVCA2Q8WZ82 227 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 RDH12Q96NR8 316 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 FRG2BQ96QU4 278 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ANKHQ9HCJ1 492 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 TMEM9Q9P0T7 183 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 TESMINQ9Y4I5 508 aa11.51□□□□□ -0.57
COL9A1-202ENST00000357250 ORC5O43913 435 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CYP11A1P05108 521 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 RPL17P18621 184 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CHRNA4P43681 627 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GALK1P51570 392 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CCR8P51685 355 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GPX6P59796 221 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 RAB2AP61019 212 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 PITPNAQ00169 270 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms