RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CHDHQ8NE62 594 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 IGSF8Q969P0 613 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MTFMTQ96DP5 389 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC47A1Q96FL8 570 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MYOCQ99972 504 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 APOL5Q9BWW9 433 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 POLR1EQ9GZS1 481 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RIBC2Q9H4K1 309 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ACTR8Q9H981 624 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARNT2Q9HBZ2 717 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC52A3Q9NQ40 469 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRDM8Q9NQV8 689 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ORC6Q9Y5N6 252 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PAPPA2Q9BXP8 1791 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TYW5A2RUC4 315 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 C17orf102A2RUQ5 167 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MITFO75030 526 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 NDUFS2O75306 463 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 UPK1BO75841 260 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PAPSS2O95340 614 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SEC24AO95486 1093 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 NDST3O95803 873 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FADS2O95864 444 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 PEX11BO96011 259 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SERPINF2P08697 491 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TGFBR1P36897 503 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC26A3P40879 764 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 AP2S1P53680 142 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ERVPABLB-1P60509 514 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 HMGCS1Q01581 520 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 NKG7Q16617 165 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 HIST2H2ACQ16777 129 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTDC1Q4AE62 458 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF544Q6NX49 715 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FBXL22Q6P050 247 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 LETMD1Q6P1Q0 360 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ANKRD46Q86W74 232 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 LGI2Q8N0V4 545 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR6Q1Q8NGQ2 317 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 BPIFB1Q8TDL5 484 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RORBQ92753 470 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SERPINB11Q96P15 392 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 FERD3LQ96RJ6 166 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZSCAN5AQ9BUG6 496 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 MIR1-1HGQ9H1L0 117 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 SMOC2Q9H3U7 446 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 CSNK1G1Q9HCP0 422 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 RASSF1Q9NS23 344 aa8.08□□□□□ -1.12
CDC42SE1-201ENST00000357235 TEX51A0A1B0GUA7 166 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 LOC100130705A0A1B0GUX0 176 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATP6V1G2-DDX39BF2Z307 99 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 UPK1AO00322 258 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PDPK1O15530 556 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DIRAS1O95057 198 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF682O95780 498 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MLYCDO95822 493 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PTTG1O95997 202 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 HTR1AP08908 422 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 GSTM2P28161 218 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 GJA5P36382 358 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 GDF5P43026 501 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 NCS1P62166 190 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DSC3Q14574 896 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DPY19L1Q2PZI1 675 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 C5orf22Q49AR2 442 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MS4A13Q5J8X5 152 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 NDUFAF5Q5TEU4 345 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MANEALQ5VSG8 457 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 IRAK1BP1Q5VVH5 260 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MSANTD2Q6P1R3 559 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 Q6ZSR9 355 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 THEM5Q8N1Q8 247 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PIK3C3Q8NEB9 887 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 LPCAT1Q8NF37 534 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 RHOXF1Q8NHV9 184 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 RHEBL1Q8TAI7 183 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARRDC2Q8TBH0 407 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MCOLN3Q8TDD5 553 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DACT3Q96B18 629 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DMRTB1Q96MA1 342 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 EGFL8Q99944 293 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ACBD6Q9BR61 282 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 UGT2B28Q9BY64 529 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MUC13Q9H3R2 512 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 IKZF5Q9H5V7 419 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PLSCR3Q9NRY6 295 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MAT2BQ9NZL9 334 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLCO3A1Q9UIG8 710 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 DNMT3LQ9UJW3 386 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PCTPQ9UKL6 214 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 NUP50Q9UKX7 468 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 A0A0D9SEW6 157 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MBLAC1A4D2B0 266 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRIM77I1YAP6 450 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms