RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 C6orf89Q6UWU4 347 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 LSM14AQ8ND56 463 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 HEXDCQ8WVB3 486 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 LOC100509620A0A075B734 347 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 OR6C70A6NIJ9 312 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 RENP00797 406 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MT-ND1P03886 318 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ANXA8P13928 327 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 TNFSF9P41273 254 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MAP3K8P41279 467 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 LHFPL3Q86UP9 236 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 PNLDC1Q8NA58 520 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 DNAAF1Q8NEP3 725 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC22A8Q8TCC7 542 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 LRTOMTQ8WZ04 291 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC25A36Q96CQ1 311 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 BRD7Q9NPI1 651 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ALG5Q9Y673 324 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 FAM189A1O60320 539 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GABBR2O75899 941 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 C1RP00736 705 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MSX1P28360 303 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MARCKSL1P49006 195 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GTF2H2Q13888 395 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GRM3Q14832 879 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 OGFOD2Q6N063 350 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GTF2H2CQ6P1K8 395 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 USP30Q70CQ3 517 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MKS1Q9NXB0 559 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF878C9JN71 531 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 S100A10P60903 97 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 RPP38P78345 283 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LCP2Q13094 533 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TIGD6Q17RP2 521 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TPRG1LQ5T0D9 272 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 REP15Q6BDI9 236 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 IFT27Q9BW83 186 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 WASHC1A8K0Z3 465 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 WASH3PC4AMC7 463 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 EFNA1P20827 205 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LIMK2P53671 638 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 DAG1Q14118 895 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF404Q494X3 552 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 WASH2PQ6VEQ5 465 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 PHC2Q8IXK0 858 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 EIF2B3Q9NR50 452 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 MAFKO60675 156 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 IFNW1P05000 195 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CHRM5P08912 532 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CD36P16671 472 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CCNOP22674 350 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CORO1AP31146 461 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 RAB39AQ14964 217 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 C1orf186Q6ZWK4 172 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CHST9Q7L1S5 443 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TRUB1Q8WWH5 349 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 COPS5Q92905 334 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 KCTD5Q9NXV2 234 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ALDH4A1P30038 563 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 HMBOX1Q6NT76 420 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 SDR16C5Q8N3Y7 309 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 OR4K2Q8NGD2 314 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 OR5M3Q8NGP4 307 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 OR1D2P34982 312 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CASRP41180 1078 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CLEC6AQ6EIG7 209 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CIR1Q86X95 450 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 DCBLD1Q8N8Z6 715 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TESMINQ9Y4I5 508 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TRAPPC6AO75865 159 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 MPSTP25325 297 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 EEFSECP57772 596 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ARFRP1Q13795 201 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ELMOD2Q8IZ81 293 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 GRHL3Q8TE85 626 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CYP3A7-CYP3A51PA0A087WV96 503 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CXCL11O14625 94 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CYP3A7P24462 503 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 PRKCHP24723 683 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 NOMO3P69849 1222 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 VMACQ2NL98 169 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 DCLRE1AQ6PJP8 1040 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LINGO4Q6UY18 593 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF767PQ75MW2 155 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC26A9Q7LBE3 791 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms