RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ARMC5Q96C12 935 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 ZBED6CLQ96FA7 236 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 CACNA1SQ13698 1873 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 RGSL1A5PLK6 1076 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CBX6O95503 412 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CYP17A1P05093 508 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 COX4I1P13073 169 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CSNK2A2P19784 350 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 SLC7A1P30825 629 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 SPIBQ01892 262 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 AGTRAPQ6RW13 159 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 SCD5Q86SK9 330 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ADGRG6Q86SQ4 1221 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 THOC6Q86W42 341 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 GJD3Q8N144 294 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CMTM7Q96FZ5 175 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 BORCS6Q96GS4 357 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ART5Q96L15 291 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 RTP3Q9BQQ7 232 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CDADC1Q9BWV3 514 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 C1orf109Q9NX04 203 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 PCDH7O60245 1069 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CER1O95813 267 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 GRIA3P42263 894 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ANGPT1Q15389 498 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 TRMT5Q32P41 509 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 ARL13AQ5H913 290 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 PIM3Q86V86 326 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 OR2T34Q8NGX1 318 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 APOL4Q9BPW4 351 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ZSCAN32Q9NX65 697 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ZNF180Q9UJW8 692 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CD6P30203 668 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 MRPS21P82921 87 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 PTSQ03393 145 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 KIAA2013Q8IYS2 634 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 SMYD1Q8NB12 490 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 FAM98AQ8NCA5 519 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 TRPV3Q8NET8 790 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 LMO3Q8TAP4 145 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 DNAJC9Q8WXX5 260 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 TSGA13Q96PP4 275 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 BTBD10Q9BSF8 475 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 KLF16Q9BXK1 252 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 SPAG4Q9NPE6 437 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CYTH4Q9UIA0 394 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 PADI2Q9Y2J8 665 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 N4BP2Q86UW6 1770 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 KRT8P05787 483 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 F7P08709 466 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 GIMD1P0DJR0 217 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 SAGP10523 405 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 CLCN7P51798 805 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 POLR2JP52435 117 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 UGT2B15P54855 530 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 PER3P56645 1201 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 NFKB2Q00653 900 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 HHEXQ03014 270 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 HNRNPA1L2Q32P51 320 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 GCNT6Q5T4J0 391 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 HTR3DQ70Z44 454 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 FAM220AQ7Z4H9 259 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 FGD2Q7Z6J4 655 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 ZNF605Q86T29 641 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 WDTC1Q8N5D0 677 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 OR5M3Q8NGP4 307 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 WDR36Q8NI36 951 aaKnown RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 OLFM3Q96PB7 478 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 SLC38A2Q96QD8 506 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 VPS35Q96QK1 796 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 MYLK2Q9H1R3 596 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 TRIM39Q9HCM9 518 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 NLE1Q9NVX2 485 aaPredicted RBP9.5□□□□□ -0.89
GABPA-201ENST00000354828 KLRF1Q9NZS2 232 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 PACSIN3Q9UKS6 424 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 CNTN6Q9UQ52 1028 aa9.5□□□□□ -0.89
GABPA-201ENST00000354828 LCHNA4D1U4 455 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 XKRYO14609 159 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 PRPS2P11908 318 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 MAOBP27338 520 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 PTPN5P54829 565 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLC7A9P82251 487 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SEMA3AQ14563 771 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 CDC73Q6P1J9 531 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 Q6ZSR6 202 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 GPR149Q86SP6 731 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ANKRD46Q86W74 232 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 TMEM139Q8IV31 216 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 FAM13CQ8NE31 585 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 EEF1AKMT1Q8WVE0 214 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 TRMT2BQ96GJ1 504 aaKnown RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 PPM1MQ96MI6 270 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms