RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OLAHQ9NV23 265 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 IFT80Q9P2H3 777 aaPredicted RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 SLC24A2Q9UI40 661 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 SH3BGRL2Q9UJC5 107 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 TMPRSS11EQ9UL52 423 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ZFHX3Q15911 3703 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 LRRD1A4D1F6 860 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CTAGE15A4D2H0 777 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 BIRC5O15392 142 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 KCNJ13O60928 360 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 KLF7O75840 302 aaPredicted RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 ATP6V1G2O95670 118 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 FAM107AO95990 144 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 MMP2P08253 660 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GSTA2P09210 222 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ST6GAL1P15907 406 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CCNCP24863 283 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CTSCP53634 463 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GNG11P61952 73 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 VSNL1P62760 191 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GNGT1P63211 74 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ZNF789Q5FWF6 425 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 NCBP2-AS2Q69YL0 99 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CCDC121Q6ZUS5 278 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 DET1Q7L5Y6 550 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 MAATS1Q7Z4T9 603 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 TMC3Q7Z5M5 1100 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 PPP1R32Q7Z5V6 425 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 MRGPRGQ86SM5 289 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CTAGE6Q86UF2 777 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CTAGE4Q8IX94 777 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GPR135Q8IZ08 494 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CARFQ8N187 725 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 RASGEF1AQ8N9B8 481 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 VPS35Q96QK1 796 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ZCCHC2Q9C0B9 1178 aaKnown RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 EPS8L2Q9H6S3 715 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 SYTL2Q9HCH5 934 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 C1GALT1Q9NS00 363 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 AMACRQ9UHK6 382 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 POMT2Q9UKY4 750 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ZNF148Q9UQR1 794 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CELSR1Q9NYQ6 3014 aa10.83□□□□□ -0.67
RTN3-204ENST00000354497 SETD2Q9BYW2 2564 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 C5orf60A6NFR6 353 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 LRRC10BA6NIK2 292 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 MT-CYBP00156 380 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 FTLP02792 175 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 CD48P09326 243 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 SLC35G4P0C7Q5 338 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 PVRP15151 417 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 CCND1P24385 295 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 UBXN1Q04323 297 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 DMPKQ09013 629 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 AIMP2Q13155 320 aaKnown RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 PPP2R5EQ16537 467 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 AGAP7PQ5VUJ5 663 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 BNC2Q6ZN30 1099 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 LINC00696Q6ZRV3 163 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 CDH24Q86UP0 819 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 ANKRD13BQ86YJ7 626 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 TMEM139Q8IV31 216 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 BEND7Q8N7W2 519 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 BCORP1Q8N888 145 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 BRSK1Q8TDC3 778 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 AGAP4Q96P64 663 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 SMC6Q96SB8 1091 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 CEP41Q9BYV8 373 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 TRIM8Q9BZR9 551 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 FAM192AQ9GZU8 254 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 KIR3DX1Q9H7L2 352 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 MAGEE1Q9HCI5 957 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 NFKBIL1Q9UBC1 381 aaPredicted RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
RTN3-204ENST00000354497 FBXL4Q9UKA2 621 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 CDYLQ9Y232 598 aa10.83□□□□□ -0.68
RTN3-204ENST00000354497 NF1P21359 2839 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 CCDC78A2IDD5 438 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 AGPSO00116 658 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 KCNK1O00180 336 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 CCL21O00585 134 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 AURKAO14965 403 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 GPR39O43194 453 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 NADKO95544 446 aaPredicted RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 POLBP06746 335 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 AKT1P31749 480 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 DCDP81605 110 aaKnown RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 OTUD4Q01804 1114 aaKnown RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 KRT72Q14CN4 511 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 PRKD1Q15139 912 aaPredicted RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 TLR1Q15399 786 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 ZNF630Q2M218 657 aaPredicted RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 DEFB110Q30KQ9 67 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 FNBP1LQ5T0N5 605 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
RTN3-204ENST00000354497 B3GNTL1Q67FW5 361 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms