RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 OR52B2Q96RD2 323 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 BARD1Q99728 777 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 MIR1-1HGQ9H1L0 117 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 KLHL28Q9NXS3 571 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CLDN24A6NM45 220 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 MCIDASD6RGH6 385 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PRKYO43930 277 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SEC14L2O76054 403 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CNTN5O94779 1100 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 JUNBP17275 347 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 SUPT20HL1Q3ZLR7 823 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 HYIQ5T013 277 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SULF1Q8IWU6 871 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PTGR2Q8N8N7 351 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ACOX2Q99424 681 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 EIF2B3Q9NR50 452 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 CD300AQ9UGN4 299 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ANGPT4Q9Y264 503 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PCDHB3Q9Y5E6 796 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CNTNAP1P78357 1384 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ATRNO75882 1429 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 FAM234BA2RU67 622 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 F8W036 122 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NUPL2O15504 423 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZNF780AO75290 641 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 F9P00740 461 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 MSR1P21757 451 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 DDX6P26196 483 aaKnown RBP eCLIP4.95□□□□□ -1.62
SKP1-202ENST00000353411 OMPP47874 163 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GMPSP49915 693 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 GBX2P52951 348 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 BLOC1S1P78537 153 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CLCQ05315 142 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TSTQ16762 297 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 GPR65Q8IYL9 337 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CDK20Q8IZL9 346 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TWIST2Q8WVJ9 160 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SMURF2Q9HAU4 748 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SNX6Q9UNH7 406 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 FARSAQ9Y285 508 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 A0A1W2PPL8 197 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 OAZ2O95190 189 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 MBP02144 154 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 LINC00032P0C843 101 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NCK1P16333 377 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 EPCAMP16422 314 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 C19orf57Q0VDD7 668 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TCP10Q12799 353 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CHAF1BQ13112 559 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TATDN3Q17R31 274 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 SLC22A10Q63ZE4 541 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 LCN8Q6JVE9 175 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PAMR1Q6UXH9 720 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 LYSMD2Q8IV50 215 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZNF615Q8N8J6 731 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TBL1YQ9BQ87 522 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ARL6Q9H0F7 186 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 TCF7L1Q9HCS4 588 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 ABI2Q9NYB9 513 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 ZNF70Q9UC06 446 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 NARFQ9UHQ1 456 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 DNMT3LQ9UJW3 386 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PER2O15055 1255 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 CCNB2O95067 398 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 CDRT1O95170 752 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 CXCR4P61073 352 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 GRB14Q14449 540 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 AKR1C8PQ5T2L2 129 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 STEAP3Q658P3 488 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 OR2T5Q6IEZ7 315 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 C4orf32Q8N8J7 132 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 C2orf69Q8N8R5 385 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 ACBD4Q8NC06 268 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 OR2T29Q8NH02 315 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 BSNDQ8WZ55 320 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 FOPNLQ96NB1 174 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 RBCK1Q9BYM8 510 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 SEMA4BQ9NPR2 832 aaPredicted RBP4.94□□□□□ -1.62
SKP1-202ENST00000353411 RAD18Q9NS91 495 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 OLAHQ9NV23 265 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 CNTN6Q9UQ52 1028 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 TCAF1Q9Y4C2 921 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 MIA3Q5JRA6 1907 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 MTCL1Q9Y4B5 1905 aaKnown RBP4.94□□□□□ -1.62
SKP1-202ENST00000353411 PRSS51A0A1B0GVH4 220 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 RFXANKO14593 260 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 KIAA0513O60268 411 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 ONECUT3O60422 494 aaPredicted RBP4.94□□□□□ -1.62
SKP1-202ENST00000353411 ZNF432O94892 652 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 C1QBP02746 253 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 RLN2P04090 185 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 FABP1P07148 127 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 BMP4P12644 408 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 CA5AP35218 305 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 RPL3P39023 403 aaKnown RBP4.94□□□□□ -1.62
SKP1-202ENST00000353411 HTRA4P83105 476 aaPredicted RBP4.94□□□□□ -1.62
SKP1-202ENST00000353411 UAP1L1Q3KQV9 507 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 LRIT3Q3SXY7 679 aa4.94□□□□□ -1.62
SKP1-202ENST00000353411 TOR2AQ5JU69 321 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms