RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MAGEA3P43357 314 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CLK1P49759 484 aaKnown RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 RUNX1T1Q06455 604 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF33BQ06732 778 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 KLHL12Q53G59 568 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SPIN4Q56A73 249 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 B3GNT6Q6ZMB0 384 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 FAM124AQ86V42 546 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 OR2T34Q8NGX1 318 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 OR2T3Q8NH03 318 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 EEF1AKMT1Q8WVE0 214 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SMPDL3AQ92484 453 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF607Q96SK3 696 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 TMEM79Q9BSE2 394 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ATG10Q9H0Y0 220 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 TREX1Q9NSU2 369 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 TRIM43BA6NCK2 446 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 DHRS4L1P0CG22 281 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SLC6A4P31645 630 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ADRA1AP35348 466 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CRATP43155 626 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 EEFSECP57772 596 aaKnown RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CCNYL2Q5T2Q4 361 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 RNF148Q8N7C7 305 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 GLYATL1Q969I3 302 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CD244Q9BZW8 370 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 FAPQ12884 760 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PDCD4Q53EL6 469 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 ANO7Q6IWH7 933 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PCDHGB3Q9Y5G1 929 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 SNPHO15079 494 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 CLOCKO15516 846 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 HOXB2P14652 356 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PRPS1L1P21108 318 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 HTRA3P83110 453 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 NFKB2Q00653 900 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 TSC22D1Q15714 1073 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 KCTD11Q693B1 232 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 IYDQ6PHW0 289 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 SLC44A2Q8IWA5 706 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PQLC1Q8N2U9 271 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 STX19Q8N4C7 294 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 SVOPQ8N4V2 548 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 GPR156Q8NFN8 814 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 ERLEC1Q96DZ1 483 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 FAM83CQ9BQN1 747 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 OSBPL11Q9BXB4 747 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PRKCGP05129 697 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 ZDHHC11BP0C7U3 371 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 TIE1P35590 1138 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 RPS21P63220 83 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 HEPACAMQ14CZ8 416 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 TGFBIQ15582 683 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 SF1Q15637 639 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 PLA2G4EQ3MJ16 856 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 UBAP2Q5T6F2 1119 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 GCNT7Q6ZNI0 430 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 OR4A15Q8NGL6 344 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 OSBPL10Q9BXB5 764 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 THUMPD1Q9NXG2 353 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 CXorf51AA0A1B0GTR3 108 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 ERN1O75460 977 aaKnown RBP11.9□□□□□ -0.5
SMAD9-201ENST00000350148 HPGDP15428 266 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 TNNI3P19429 210 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 CCR8P51685 355 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 FBXO43Q4G163 708 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 DCUN1D3Q8IWE4 304 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 TSTD1Q8NFU3 115 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 LCN9Q8WX39 176 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 L3HYPDHQ96EM0 354 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 FBXL12Q9NXK8 326 aa11.9□□□□□ -0.5
SMAD9-201ENST00000350148 GSAPA4D1B5 854 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CDC7O00311 574 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 POP7O75817 140 aaKnown RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 HSD3B1P14060 373 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 HRH2P25021 359 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 HSD3B2P26439 372 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CD70P32970 193 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 RGS21Q2M5E4 152 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 HLA-DQA1Q5Y7H0 255 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MBOAT1Q6ZNC8 495 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CYP2U1Q7Z449 544 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 GOLGA7Q7Z5G4 137 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TP53INP2Q8IXH6 220 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CADM1Q9BY67 442 aaKnown RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 BTBD1Q9H0C5 482 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TPRKBQ9Y3C4 175 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 FAM92AA1XBS5 289 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 FAM47E-STBD1D6RA91 191 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 KAT7O95251 611 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 UQCRBP14927 111 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms