RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 USP34Q70CQ2 3546 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 KIAA1549LQ6ZVL6 1849 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PRSS51A0A1B0GVH4 220 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ANHXE9PGG2 379 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 K7EQS6 105 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 K7ESM1 405 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 IFRD1O00458 451 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ANGPT2O15123 496 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 INPP4BO15327 924 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 RGS14O43566 566 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 VEGFDO43915 354 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 UGDHO60701 494 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ULK1O75385 1050 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 RSL1D1O76021 490 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 NPPAP01160 153 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KRT6AP02538 564 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CATP04040 527 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KRT6BP04259 564 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 EPHX1P07099 455 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 C8BP07358 591 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 G6PDP11413 515 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 HSD17B1P14061 328 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ACPPP15309 386 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ACADSP16219 412 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 JAK1P23458 1154 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 SLC6A2P23975 617 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ACADLP28330 430 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 GDI1P31150 447 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 BMP8BP34820 402 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 MTHFRP42898 656 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TNFRSF4P43489 277 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 GPR1P46091 355 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 GNPDA1P46926 289 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PREPP48147 710 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KRT6CP48668 564 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 POLR2JP52435 117 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 NME5P56597 212 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KCNK10P57789 538 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TAS2R38P59533 333 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PLOD1Q02809 727 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CNTN1Q12860 1018 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ABRQ12979 859 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PRKG2Q13237 762 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 FLOT2Q14254 428 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 NR6A1Q15406 480 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 FXNQ16595 210 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 RFTN2Q52LD8 501 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM31Q5JXX7 168 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 C6orf10Q5SRN2 563 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 AGBL4Q5VU57 503 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 IRAK1BP1Q5VVH5 260 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CES5AQ6NT32 575 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CYP20A1Q6UW02 462 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PRR23BQ6ZRT6 265 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 C11orf96Q7Z7L8 435 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM126BQ8IUX1 230 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF547Q8IVP9 402 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 SLC15A3Q8IY34 581 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KBTBD2Q8IY47 623 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 RGL4Q8IZJ4 473 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 AADATQ8N5Z0 425 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LILRA3Q8N6C8 439 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 FNDC5Q8NAU1 212 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 OR56A3Q8NH54 315 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 SLC26A7Q8TE54 656 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PYDC1Q8WXC3 89 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ATL1Q8WXF7 558 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 DNAJC9Q8WXX5 260 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 EZH1Q92800 747 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ZUFSPQ96AP4 578 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM159Q96B96 161 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LRRC58Q96CX6 371 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 SLC45A3Q96JT2 553 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF514Q96K75 400 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 MSLNLQ96KJ4 702 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 FCRL1Q96LA6 429 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CCDC138Q96M89 665 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 RIPOR3Q96MK2 946 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 UHRF1Q96T88 793 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PKP4Q99569 1192 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 C1orf50Q9BV19 199 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 TRMT61BQ9BVS5 477 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ACPTQ9BZG2 426 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LRTM1Q9HBL6 345 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 DYRK4Q9NR20 520 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 FARSBQ9NSD9 589 aaKnown RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 GID8Q9NWU2 228 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 CMTM6Q9NX76 183 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ADA2Q9NZK5 511 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LMCD1Q9NZU5 365 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 STOX2Q9P2F5 926 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 ATXN10Q9UBB4 475 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 KLQ9UEF7 1012 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 LEF1Q9UJU2 399 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PSMD13Q9UNM6 376 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
TRIM55-203ENST00000350034 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms