RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 MARC2Q969Z3 335 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 S100A14Q9HCY8 104 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 VPS51Q9UID3 782 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ATPIF1Q9UII2 106 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
RFC1-201ENST00000349703 N6AMT1Q9Y5N5 214 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 GOLGA8TH3BQL2 631 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DNALI1O14645 258 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ZNF12P17014 697 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 RPA3P35244 121 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 SPAM1P38567 509 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PBX3P40426 434 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 RAP1GDS1P52306 607 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CSNK2A1P68400 391 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ECH1Q13011 328 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CYTH1Q15438 398 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TRIM16LQ309B1 348 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CCDC153Q494R4 210 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 GLRA4Q5JXX5 417 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PRAMEF8Q5VWM4 474 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PRAMEF7Q5VXH5 474 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DCDC5Q6ZRR9 648 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 ARPINQ7Z6K5 226 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CILP2Q8IUL8 1156 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CSNK2A3Q8NEV1 391 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 NFKBIDQ8NI38 313 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SMG7Q92540 1137 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 BORCS5Q969J3 196 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 ORAI1Q96D31 301 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 BTBD1Q9H0C5 482 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MARCH7Q9H992 704 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CAB39LQ9H9S4 337 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 GOLGA2P5Q9HBQ8 144 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SLC38A7Q9NVC3 462 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 FNIP2Q9P278 1114 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 LAMP5Q9UJQ1 280 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MRTO4Q9UKD2 239 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 RPH3AQ9Y2J0 694 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 SLC45A1Q9Y2W3 748 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 RIC1Q4ADV7 1423 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 FAM166BA8MTA8 275 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 KPNA7A9QM74 516 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 C9orf172C9J069 976 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 BTBD19C9JJ37 291 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DFFAO00273 331 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 HTRA2O43464 458 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 CYTH3O43739 400 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 LIASO43766 372 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DEAF1O75398 565 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 KRT75O95678 551 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 APOA1P02647 267 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SNRPAP09012 282 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ALDOCP09972 364 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CYP11B2P19099 503 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CRABP2P29373 138 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 ZNF81P51508 661 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DSC2Q02487 901 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 HSF2Q03933 536 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CRYZQ08257 329 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 KEAP1Q14145 624 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TIPARPQ7Z3E1 657 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 KCTD20Q7Z5Y7 419 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SAPCD2Q86UD0 394 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 NHLRC2Q8NBF2 726 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 RBM15BQ8NDT2 890 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 CXorf40BQ96DE9 158 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DDX50Q9BQ39 737 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 MMTAG2Q9BU76 263 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TRPV6Q9H1D0 765 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 RNPEPQ9H4A4 650 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 BEX1Q9HBH7 125 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CACNG4Q9UBN1 327 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DNAJC16Q9Y2G8 782 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 OR6C68A6NDL8 312 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TRMUO75648 421 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 JUNP05412 331 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 CALB1P05937 261 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CD58P19256 250 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 NUMBP49757 651 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 GZMKP49863 264 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 COX10Q12887 443 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 C16orf72Q14CZ0 275 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PKN2Q16513 984 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ACSBG2Q5FVE4 666 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TMEM240Q5SV17 173 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MOB2Q70IA6 237 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TSEN54Q7Z6J9 526 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 LNX1Q8TBB1 728 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 EME1Q96AY2 570 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PPWD1Q96BP3 646 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 EGFL8Q99944 293 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 NAA11Q9BSU3 229 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 LRRC3Q9BY71 257 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 BCL2L14Q9BZR8 327 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TLE6Q9H808 572 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms