RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZDHHC21Q8IVQ6 265 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 C4orf32Q8N8J7 132 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 C1orf216Q8TAB5 229 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 DENND1AQ8TEH3 1009 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 GDI1P31150 447 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 CAMKVQ8NCB2 501 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 RGMAQ96B86 450 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 PIWIL1Q96J94 861 aaKnown RBP22.67■■□□□ 1.22
NPAS3-201ENST00000346562 TBC1D17Q9HA65 648 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 ILVBLA1L0T0 632 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 SNX4O95219 450 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 TACSTD2P09758 323 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 PGAM2P15259 253 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 JAM2P57087 298 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 ARSIQ5FYB1 569 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 P2RY8Q86VZ1 359 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 ZSCAN5AQ9BUG6 496 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 CLDND1Q9NY35 253 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 TMA7Q9Y2S6 64 aaKnown RBP22.67■■□□□ 1.22
NPAS3-201ENST00000346562 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
NPAS3-201ENST00000346562 COQ9O75208 318 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 NR2C1P13056 603 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 TARDBPQ13148 414 aaKnown RBP eCLIP22.67■■□□□ 1.22
NPAS3-201ENST00000346562 ARMC10Q8N2F6 343 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 HPS1Q92902 700 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 SLC25A36Q96CQ1 311 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 SUV39H2Q9H5I1 410 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 SDHAF3Q9NRP4 125 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 TRIM64A6NGJ6 449 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 CD48P09326 243 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 SLURP2P0DP57 97 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 TXNL4AP83876 142 aaKnown RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 PNPLA2Q96AD5 504 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ZDHHC3Q9NYG2 299 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 A0A1W2PRB8 838 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 C2orf71A6NGG8 1288 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 H3BNX3 289 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 AIREO43918 545 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 CELF5Q8N6W0 485 aaKnown RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 CCM2Q9BSQ5 444 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF639Q9UID6 485 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 TLL2Q9Y6L7 1015 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 SQORQ9Y6N5 450 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 SOWAHBA6NEL2 793 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 OR1I1O60431 355 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ACP5P13686 325 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF3P17036 446 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 C6orf52Q5T4I8 152 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 PHF19Q5T6S3 580 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 DNM1P34Q6PK57 102 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 CHERPQ8IWX8 916 aaKnown RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 TRMT61BQ9BVS5 477 aaKnown RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ITM2CQ9NQX7 267 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 GMEB2Q9UKD1 530 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 EDDM13A0A1B0GTR0 161 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 A0A1W2PRU2 124 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 HSD11B1P28845 292 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 SLC1A2P43004 574 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 LINGO2Q7L985 606 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 PLA2G15Q8NCC3 412 aa22.66■■□□□ 1.22
NPAS3-201ENST00000346562 RBM15BQ8NDT2 890 aaKnown RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF548Q8NEK5 533 aaPredicted RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 PAK6Q9NQU5 681 aaPredicted RBP22.66■■□□□ 1.22
NPAS3-201ENST00000346562 SP140Q13342 867 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 CNKSR3Q6P9H4 555 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 C14orf105Q9NVL8 296 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 FAM234BA2RU67 622 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 SLC22A2O15244 555 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 POU2F1P14859 743 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 CSNK2A2P19784 350 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-201ENST00000346562 GBX2P52951 348 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-201ENST00000346562 CEBPGP53567 150 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 ZFP69Q49AA0 526 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 GKN2Q86XP6 184 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 KXD1Q9BQD3 176 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 NDC1Q9BTX1 674 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 GDAP2Q9NXN4 497 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 TVP23BQ9NYZ1 205 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 CA12O43570 354 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 LCA5LO95447 670 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 LMO2P25791 158 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 VWA5B1Q5TIE3 1220 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 FIP1L1Q6UN15 594 aaKnown RBP22.65■■□□□ 1.22
NPAS3-201ENST00000346562 ECHDC2Q86YB7 292 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 EPYCQ99645 322 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 DGKBQ9Y6T7 804 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 CPNE3O75131 537 aaKnown RBP22.65■■□□□ 1.22
NPAS3-201ENST00000346562 RLN2P04090 185 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 NFKB2Q00653 900 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 HTRA1Q92743 480 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 RB1P06400 928 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 ASPAP45381 313 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 MBLAC2Q68D91 279 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 PYHIN1Q6K0P9 492 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 MSANTD1Q6ZTZ1 278 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF781Q8N8C0 355 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 FAM13CQ8NE31 585 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 DBF4BQ8NFT6 615 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 FAM110BQ8TC76 370 aa22.65■■□□□ 1.22
NPAS3-201ENST00000346562 KCTD13Q8WZ19 329 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms