RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ELL3Q9HB65 397 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 OR2AG2A6NM03 316 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 OR1F1O43749 312 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CYBAP13498 195 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GM2AP17900 193 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GNAZP19086 355 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 OGNP20774 298 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 C4BPBP20851 252 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CPN2P22792 545 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 NFATC2Q13469 925 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 METTL21CQ5VZV1 264 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 MED27Q6P2C8 311 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 OR4K2Q8NGD2 314 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SMAD5Q99717 465 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SLC25A51Q9H1U9 297 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PDLIM7Q9NR12 457 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 FNIP2Q9P278 1114 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 FAM170BA6NMN3 283 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 UPK3BL1B0FP48 263 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 UPK3BL2E5RIL1 263 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GPR37L1O60883 481 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 LRATO95237 230 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 AHSGP02765 367 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CYP4B1P13584 511 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 XIAPP98170 497 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PNPLA2Q96AD5 504 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 LRIG1Q96JA1 1093 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 MCMBPQ9BTE3 642 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GIMAP2Q9UG22 337 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 RPS6KA6Q9UK32 745 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 POLR3HQ9Y535 204 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 RGS5O15539 181 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 FAM20BO75063 409 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SIX3O95343 332 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CDH15P55291 814 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 MC1RQ01726 317 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 UTP15Q8TED0 518 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PSMG2Q969U7 264 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 WDR92Q96MX6 357 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PKP2Q99959 881 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 COL4A1P02462 1669 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 DLX3O60479 287 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 BEST1O76090 585 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 RECQL5O94762 991 aaPredicted RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GJA1P17302 382 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SERPINB1P30740 379 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 POLD2P49005 469 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SUOXP51687 545 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 GPR33Q49SQ1 333 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 RBM20Q5T481 1227 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 TYW3Q6IPR3 259 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 ABRAXAS1Q6UWZ7 409 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 KBTBD2Q8IY47 623 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 KCNJ9Q92806 393 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SLC38A2Q96QD8 506 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 FBRSL1Q9HCM7 1045 aaKnown RBP10.68□□□□□ -0.7
CLCN6-202ENST00000346436 ITM2CQ9NQX7 267 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 DDX60LQ5H9U9 1706 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PDLIM1O00151 329 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 TP53I11O14683 189 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PIP5K1BO14986 540 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 TSPAN6O43657 245 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 OR6B1O95007 311 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 KAT7O95251 611 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SYNGR4O95473 234 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 HEXBP07686 556 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CTSAP10619 480 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 AOC1P19801 751 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CYP4F2P78329 520 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PRR5P85299 388 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 LY6G5CQ5SRR4 150 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PIM3Q86V86 326 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 GALNT15Q8N3T1 639 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PNPLA1Q8N8W4 532 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 OR2AP1Q8NGE2 309 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SMPDL3BQ92485 455 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 BCL2L14Q9BZR8 327 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CD84Q9UIB8 345 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 LILRB3O75022 631 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 FESP07332 822 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 MTHFD1P11586 935 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 RNFT2Q96EX2 444 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CCDC28BQ9BUN5 200 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SMURF2Q9HAU4 748 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PCDH12Q9NPG4 1184 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 EIF2B3Q9NR50 452 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 ADAMTS6Q9UKP5 1117 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 RARRES3Q9UL19 164 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 RAB26Q9ULW5 256 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms