RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DHRSXQ8N5I4 330 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 OR2A12Q8NGT7 310 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 SKA2Q8WVK7 121 aaPredicted RBP15.07■□□□□ 0
UPF3B-202ENST00000345865 AURKBQ96GD4 344 aaPredicted RBP15.07■□□□□ 0
UPF3B-202ENST00000345865 CCDC115Q96NT0 180 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 OR52E6Q96RD3 313 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 TBCDQ9BTW9 1192 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 BDH2Q9BUT1 245 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 SLC29A3Q9BZD2 475 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 LINC00597Q9H2U6 94 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 GORASP2Q9H8Y8 452 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 PARVBQ9HBI1 364 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 KLHL42Q9P2K6 505 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.07■□□□□ 0
UPF3B-202ENST00000345865 PCDHGA11Q9Y5H2 935 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 GRM6O15303 877 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 SGTAO43765 313 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 CXCL14O95715 111 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 OR56A5P0C7T3 313 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 RAP2AP10114 183 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 SLC6A12P48065 614 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 IST1P53990 364 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ADARB1P78563 741 aaKnown RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 DYNC1I2Q13409 638 aaKnown RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 BOP1Q14137 746 aaKnown RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 PTCHD3Q3KNS1 767 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 RNF175Q8N4F7 328 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 BEND7Q8N7W2 519 aaPredicted RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 GLB1L3Q8NCI6 653 aaPredicted RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 FBXO30Q8TB52 745 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 TMBIM1Q969X1 311 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 LIN28AQ9H9Z2 209 aaKnown RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 SERHLQ9NQF3 203 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ASAH2Q9NR71 780 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 PCDHB14Q9Y5E9 798 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 NUAK1O60285 661 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 TULP3O75386 442 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 CLTBP09497 229 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ATP1B2P14415 290 aaPredicted RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 PPM1AP35813 382 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 PLCL1Q15111 1095 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 C1orf53Q5VUE5 145 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 HSD11B1LQ7Z5J1 315 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ADIPOR2Q86V24 386 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 SELENOMQ8WWX9 145 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 EGLN2Q96KS0 407 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ZNF641Q96N77 438 aaPredicted RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 PAIP1Q9H074 479 aaKnown RBP15.06■□□□□ 0
UPF3B-202ENST00000345865 OCEL1Q9H607 264 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 CD320Q9NPF0 282 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 HPS4Q9NQG7 708 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 C8orf4Q9NR00 106 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 ADGRE2Q9UHX3 823 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 SLC25A13Q9UJS0 675 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 SLC22A14Q9Y267 594 aa15.06■□□□□ 0
UPF3B-202ENST00000345865 TRIM43BA6NCK2 446 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 GFYI3L273 518 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 MOSPD3O75425 235 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 KRT6AP02538 564 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 C1QCP02747 245 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 KRT6BP04259 564 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 PABPC1P11940 636 aaKnown RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 KRT6CP48668 564 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 RPS14P62263 151 aaKnown RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 CTBSQ01459 385 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 ZIK1Q3SY52 487 aaPredicted RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 CDKL4Q5MAI5 379 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 ZNF648Q5T619 568 aaPredicted RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 OTOP2Q7RTS6 562 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 PATL1Q86TB9 770 aaKnown RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 ANKRD46Q86W74 232 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 PLPP6Q8IY26 295 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 KLHL23Q8NBE8 558 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 SORCS1Q8WY21 1168 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 TRIM43Q96BQ3 446 aaPredicted RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 APIPQ96GX9 242 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 TSSK3Q96PN8 268 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 INPP5KQ9BT40 448 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 BBS2Q9BXC9 721 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 RSL24D1Q9UHA3 163 aaKnown RBP15.05■□□□□ 0
UPF3B-202ENST00000345865 PPT2Q9UMR5 302 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 HCFC2Q9Y5Z7 792 aa15.05■□□□□ 0
UPF3B-202ENST00000345865 CXorf51AA0A1B0GTR3 108 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 RFPL2O75678 378 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 ASLP04424 464 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 GSNP06396 782 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 ITPKAP23677 461 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 PTPN6P29350 595 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 ARSFP54793 590 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 MAP7Q14244 749 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 FAM98BQ52LJ0 330 aaKnown RBP15.05■□□□□ -0
UPF3B-202ENST00000345865 GDPD4Q6W3E5 623 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 GCNT7Q6ZNI0 430 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 GALNT13Q8IUC8 556 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 GPR65Q8IYL9 337 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 ATG10Q9H0Y0 220 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 MTG2Q9H4K7 406 aa15.05■□□□□ -0
UPF3B-202ENST00000345865 KAT8Q9H7Z6 458 aaKnown RBP15.05■□□□□ -0
UPF3B-202ENST00000345865 NOTCH4Q99466 2003 aa15.04■□□□□ -0
UPF3B-202ENST00000345865 A0A087WXM4 84 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms