RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DESI1Q6ICB0 168 aa11.88□□□□□ -0.51
COL12A1-202ENST00000345356 RPS27LQ71UM5 84 aaKnown RBP11.88□□□□□ -0.51
COL12A1-202ENST00000345356 FAM83AQ86UY5 434 aa11.88□□□□□ -0.51
COL12A1-202ENST00000345356 TMEM199Q8N511 208 aa11.88□□□□□ -0.51
COL12A1-202ENST00000345356 THUMPD1Q9NXG2 353 aaKnown RBP11.88□□□□□ -0.51
COL12A1-202ENST00000345356 TAS2R3Q9NYW6 316 aa11.88□□□□□ -0.51
COL12A1-202ENST00000345356 ANKMY1Q9P2S6 941 aa11.88□□□□□ -0.51
COL12A1-202ENST00000345356 MROH1Q8NDA8 1641 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CREG1O75629 220 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 RPN2P04844 631 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 SAGP10523 405 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 ATXN1P54253 815 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 DSC2Q02487 901 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 C2orf80Q0P641 193 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PPP1R3AQ16821 1122 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 KLHL36Q8N4N3 616 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CIPCQ9C0C6 399 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 GIMAP2Q9UG22 337 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 IFT52Q9Y366 437 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PNCKQ6P2M8 343 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 FRRS1Q6ZNA5 592 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 BEND5Q7L4P6 421 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 ZC3HC1Q86WB0 502 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PLD6Q8N2A8 252 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 SIDT2Q8NBJ9 832 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 IKZF2Q9UKS7 526 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PCDHB1Q9Y5F3 818 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 ABHD14A-ACY1A0A1B0GW23 586 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 A8MU76 341 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PSMA6P60900 246 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 FAM76BQ5HYJ3 339 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CPNE9Q8IYJ1 553 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 OR5J2Q8NH18 312 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PSAT1Q9Y617 370 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CPQQ9Y646 472 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 GJB1P08034 283 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 DNASE1P24855 282 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 AXLP30530 894 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CDKL1Q00532 357 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 TFB2MQ9H5Q4 396 aaKnown RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 ELL3Q9HB65 397 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-202ENST00000345356 NUDT15Q9NV35 164 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PCDHB9Q9Y5E1 797 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
COL12A1-202ENST00000345356 A0A075B6Q4 140 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 DISC1C4P0D8 188 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ENTPD6O75354 484 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 BCAS1O75363 584 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 TOXO94900 526 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 OGNP20774 298 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CYP2B6P20813 491 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ACADLP28330 430 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PDHA2P29803 388 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 GABARAPL2P60520 117 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 MSANTD2Q6P1R3 559 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 STOML3Q8TAV4 291 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 IRGQQ8WZA9 623 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SH3YL1Q96HL8 342 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 RHBGQ9H310 441 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SLC7A4O43246 635 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 UPK1BO75841 260 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 RBM34P42696 430 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CXCR3P49682 368 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PLA2G16P53816 162 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 LRRC66Q68CR7 880 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SCRN2Q96FV2 425 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 MTMR10Q9NXD2 777 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SEC14L4Q9UDX3 406 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HEMK1Q9Y5R4 338 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PMM2O15305 246 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 KERAO60938 352 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HPRP00739 348 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CD40LGP29965 261 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 L1CAMP32004 1257 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CLCN4P51793 760 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ADAM8P78325 824 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 BTN3A2P78410 334 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SETMARQ53H47 684 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 C1orf189Q5VU69 101 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 KIAA1161Q6NSJ0 714 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms