RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CATSPER2Q96P56 530 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 TSSK1BQ9BXA7 367 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 DDX47Q9H0S4 455 aaKnown RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 ADNPQ9H2P0 1102 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 XAB2Q9HCS7 855 aaKnown RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 FAM60AQ9NP50 221 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 KCND1Q9NSA2 647 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 GALPQ9UBC7 116 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 PADI1Q9ULC6 663 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 NFS1Q9Y697 457 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 MYO18BQ8IUG5 2567 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 KRT87PA6NCN2 255 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 TMEM150CB9EJG8 249 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 FANCGO15287 622 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 HCRTR1O43613 425 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 KATNA1O75449 491 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 SCRG1O75711 98 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 PKLRP30613 574 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 RPS18P62269 152 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 GPS2Q13227 327 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 DHX34Q14147 1143 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 KYNUQ16719 465 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 ARMC3Q5W041 872 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 MRNIPQ6NTE8 343 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 ZNF517Q6ZMY9 492 aaPredicted RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 PTRH1Q86Y79 214 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 TMEM126BQ8IUX1 230 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 FAM20CQ8IXL6 584 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 GRK7Q8WTQ7 553 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 FAM136AQ96C01 138 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 IL17FQ96PD4 163 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 PANX3Q96QZ0 392 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 FAM117AQ9C073 453 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 LATS2Q9NRM7 1088 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 OR6C2Q9NZP2 312 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 RUVBL2Q9Y230 463 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 CRYL1Q9Y2S2 319 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
HMGN3-202ENST00000344726 SETXQ7Z333 2677 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 MDC1Q14676 2089 aaKnown RBP13.94□□□□□ -0.18
HMGN3-202ENST00000344726 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 K7EM74 188 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 SNPHO15079 494 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CPNE3O75131 537 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 MT-ND3P03897 115 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CTSBP07858 339 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CCNYL3P0C7X3 344 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 MSL3P1P0C860 447 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 SFTPCP11686 197 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 TCP1P17987 556 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 OGNP20774 298 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 PTGIRP43119 386 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 GABRA4P48169 554 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 GBX1Q14549 363 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 TMED2Q15363 201 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CCSMST1Q4G0I0 132 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 NEPROQ6NW34 567 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 UNC5DQ6UXZ4 953 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CREG2Q8IUH2 290 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 DCUN1D3Q8IWE4 304 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 DENND6AQ8IWF6 608 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 PPIL6Q8IXY8 311 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 C19orf47Q8N9M1 422 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 OR8K5Q8NH50 307 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 CAPZA3Q96KX2 299 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 TCF12Q99081 682 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 ZNF71Q9NQZ8 489 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 SAMD15Q9P1V8 674 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 ASH1LQ9NR48 2969 aaKnown RBP13.93□□□□□ -0.18
HMGN3-202ENST00000344726 PCSK5Q92824 1860 aa13.93□□□□□ -0.18
HMGN3-202ENST00000344726 UBR5O95071 2799 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-202ENST00000344726 A0A0J9YY10 115 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 MAGEB16A2A368 324 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 CDC14CA4D256 554 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 H3BMH7 237 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 DNALI1O14645 258 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-202ENST00000344726 BANF1O75531 89 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 CREG1O75629 220 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 S1PR4O95977 384 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 PAMP19021 973 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 NR1D1P20393 614 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 IVDP26440 423 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 RORAP35398 523 aa13.92□□□□□ -0.18
HMGN3-202ENST00000344726 BDKRB1P46663 353 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms