RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 EMX2Q04743 252 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 TLR1Q15399 786 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 CPSF6Q16630 551 aaKnown RBP eCLIP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 RFTN2Q52LD8 501 aaPredicted RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 EGFLAMQ63HQ2 1017 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 ERN2Q76MJ5 926 aaKnown RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 CACUL1Q86Y37 369 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 ST13P4Q8IZP2 240 aaPredicted RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 CHFRQ96EP1 664 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 PRSS16Q9NQE7 514 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 HEBP1Q9NRV9 189 aa18.14■□□□□ 0.5
HOXA9-201ENST00000343483 POLR3HQ9Y535 204 aaPredicted RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 MUC22E2RYF6 1773 aaPredicted RBP18.14■□□□□ 0.5
HOXA9-201ENST00000343483 A0A1W2PP18 115 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 TCRBV3S1A0A5B6 114 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 CCDC154A6NI56 674 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 C1QTNF3-AMACRE9PGA6 284 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 MANBAO00462 879 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 DENRO43583 198 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 G6PDP11413 515 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 SLC2A4P14672 509 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 FOSL2P15408 326 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 ITPKAP23677 461 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 MAP4P27816 1152 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 GDI1P31150 447 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 GPR1P46091 355 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 POLR2JP52435 117 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 RPL38P63173 70 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 HMGCS1Q01581 520 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 CAPRIN1Q14444 709 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 TIGD2Q4W5G0 525 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 DHFR2Q86XF0 187 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 MTFMTQ96DP5 389 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 PPP3R2Q96LZ3 170 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 ATG10Q9H0Y0 220 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 SLC52A3Q9NQ40 469 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 GID8Q9NWU2 228 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 ZIM2Q9NZV7 527 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 GMPR2Q9P2T1 348 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 THAP10Q9P2Z0 257 aaPredicted RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 HCN2Q9UL51 889 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 CNOT6Q9ULM6 557 aaKnown RBP18.14■□□□□ 0.49
HOXA9-201ENST00000343483 RAB26Q9ULW5 256 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 COL4A3Q01955 1670 aa18.14■□□□□ 0.49
HOXA9-201ENST00000343483 CAPNS1P04632 268 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 GSTM1P09488 218 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 PIM1P11309 404 aaPredicted RBP18.13■□□□□ 0.49
HOXA9-201ENST00000343483 P2RY2P41231 377 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CASP2P42575 452 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 ZFP36L2P47974 494 aaKnown RBP18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC6A12P48065 614 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CHN2P52757 468 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 GSTM4Q03013 218 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 IMPG1Q17R60 797 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC44A4Q53GD3 710 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 ATAT1Q5SQI0 421 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TTC23LQ6PF05 361 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 PARM1Q6UWI2 310 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TMEM184AQ6ZMB5 413 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 GALNT4Q8N4A0 578 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 PROKR1Q8TCW9 393 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 FGF14Q92915 247 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 FOXJ1Q92949 421 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 OR2AG1Q9H205 316 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC22A14Q9Y267 594 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CCL27Q9Y4X3 112 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TCF20Q9UGU0 1960 aaKnown RBP18.13■□□□□ 0.49
HOXA9-201ENST00000343483 ARHGEF33A8MVX0 844 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC28A1O00337 649 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 NME4O00746 187 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 IL12AP29459 219 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC7A1P30825 629 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 WASP42768 502 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 COQ5Q5HYK3 327 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 FOXB2Q5VYV0 432 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CYP20A1Q6UW02 462 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 UGT2A3Q6UWM9 527 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 MARVELD2Q8N4S9 558 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CXorf40AQ8TE69 158 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TSPEARQ8WU66 669 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 GLMNQ92990 594 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLCO4A1Q96BD0 722 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 TRAPPC9Q96Q05 1148 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 SLC29A3Q9BZD2 475 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 ZCCHC2Q9C0B9 1178 aaKnown RBP18.13■□□□□ 0.49
HOXA9-201ENST00000343483 ABCD2Q9UBJ2 740 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 CIDEBQ9UHD4 219 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 AP4B1Q9Y6B7 739 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 MTCH2Q9Y6C9 303 aa18.13■□□□□ 0.49
HOXA9-201ENST00000343483 FAM234BA2RU67 622 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 ASPDHA6ND91 283 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 FXYD1O00168 92 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 KRT6AP02538 564 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 KRT6BP04259 564 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 GRIA2P42262 883 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 KRT6CP48668 564 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 CNTN1Q12860 1018 aa18.12■□□□□ 0.49
HOXA9-201ENST00000343483 NFYCQ13952 458 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms