RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SLC45A1Q9Y2W3 748 aa9.24□□□□□ -0.93
TRERF1-201ENST00000340840 A0A0U1RQF3 1178 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HTR3EA5X5Y0 456 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PDZK1P1A8MUH7 402 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 TBX1O43435 398 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 LRATO95237 230 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CCNDBP1O95273 360 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 NTRK1P04629 796 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 FPR1P21462 350 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HTR1BP28222 390 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DNAJA1P31689 397 aaKnown RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CLCN4P51793 760 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SELPLGQ14242 412 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RFTN2Q52LD8 501 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CES5AQ6NT32 575 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PHACTR4Q8IZ21 702 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SLC22A17Q8WUG5 538 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 MROQ9BYG7 248 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 NUAK2Q9H093 628 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DHRS7Q9Y394 339 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 OR6C75A6NL08 312 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 hCG_2039718K7EN88 272 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 M0QZQ0 153 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 AREL1O15033 823 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RGS5O15539 181 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF623O75123 536 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 COQ9O75208 318 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 COX7A2P14406 83 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CTPS1P17812 591 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 KRT20P35900 424 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 TUBA1BP68363 451 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CDK5R2Q13319 367 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CDH18Q13634 790 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ABRAXAS2Q15018 415 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RNF219Q5W0B1 726 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 FAM219BQ5XKK7 198 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PSAPL1Q6NUJ1 521 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DOK6Q6PKX4 331 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PLEKHG7Q6ZR37 379 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 LINC00299Q6ZSB3 139 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 TUBA1AQ71U36 451 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DENND1CQ8IV53 801 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CARNMT1Q8N4J0 409 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 OR2T11Q8NH01 316 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 STARD8Q92502 1023 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF583Q96ND8 569 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CCDC115Q96NT0 180 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DUSP12Q9UNI6 340 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PCDHGA4Q9Y5G9 962 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SPO11Q9Y5K1 396 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CORINQ9Y5Q5 1042 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HSPE1-MOB4S4R3N1 261 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 IQCF5A8MTL0 148 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ANKRD66B4E2M5 251 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF197O14709 1029 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SULT1C4O75897 302 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 MMP2P08253 660 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 GPR15P49685 360 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 COL13A1Q5TAT6 717 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 LYPLAL1Q5VWZ2 237 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 Q6ZSR9 355 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HEATR4Q86WZ0 1026 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DCP2Q8IU60 420 aaKnown RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 GALNT13Q8IUC8 556 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ELMOD1Q8N336 334 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 CD200R1Q8TD46 325 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 FRS2Q8WU20 508 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF419Q96HQ0 510 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HHIPL1Q96JK4 782 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RTP3Q9BQQ7 232 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HEPHQ9BQS7 1158 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 COPS4Q9BT78 406 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 HERC2P3Q9BVR0 1158 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 KATNBL1Q9H079 304 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 OSER1Q9NX31 292 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZFP37Q9Y6Q3 630 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 FAM220BPB1ANY3 271 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 H7C4K7 107 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ARVCFO00192 962 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PRAMEF1O95521 474 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 MT-ND2P03891 347 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RYKP34925 604 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 MAP2K4P45985 399 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF140P52738 457 aaPredicted RBP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 OLR1P78380 273 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ACSM2AQ08AH3 577 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 RAPSNQ13702 412 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 PCBP2Q15366 365 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SYT16Q17RD7 645 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF404Q494X3 552 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 TMEM236Q5W0B7 351 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 ACSM2BQ68CK6 577 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 SERPINA9Q86WD7 417 aa9.23□□□□□ -0.93
TRERF1-201ENST00000340840 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms