RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 FBXL20Q96IG2 436 aa14.77□□□□□ -0.04
BRAT1-201ENST00000340611 ZNF347Q96SE7 839 aa14.77□□□□□ -0.04
BRAT1-201ENST00000340611 CCDC167Q9P0B6 97 aa14.77□□□□□ -0.04
BRAT1-201ENST00000340611 DEC1Q9P2X7 70 aa14.77□□□□□ -0.04
BRAT1-201ENST00000340611 WARS2Q9UGM6 360 aaKnown RBP14.77□□□□□ -0.04
BRAT1-201ENST00000340611 FAM149AA5PLN7 773 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 CENPBD1B2RD01 187 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 AKAP10O43572 662 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 FZD6O60353 706 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 TPST1O60507 370 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 NFATC1O95644 943 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 EPOP01588 193 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 CTSLP07711 333 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 ALOX5P09917 674 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 HNRNPLP14866 589 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 KCNA5P22460 613 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 GJA4P35212 333 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 HADHAP40939 763 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 KRT6CP48668 564 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 RUNX3Q13761 415 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 USP10Q14694 798 aaKnown RBP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 ZNF846Q147U1 533 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 SKIV2LQ15477 1246 aaKnown RBP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 PXDC1Q5TGL8 231 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 CHSY3Q70JA7 882 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 RPS27LQ71UM5 84 aaKnown RBP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 ZNF420Q8TAQ5 688 aaPredicted RBP14.77□□□□□ -0.05
BRAT1-201ENST00000340611 RAD21L1Q9H4I0 556 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 ADPRHL2Q9NX46 363 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 FBXO5Q9UKT4 447 aa14.77□□□□□ -0.05
BRAT1-201ENST00000340611 TBC1D3BA6NDS4 549 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 DLX3O60479 287 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ALX3O95076 343 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 DLGAP3O95886 979 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 TCF3P15923 654 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 HNF1BP35680 557 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SEPHS1P49903 392 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SNRPD1P62314 119 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 HERC3Q15034 1050 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 PLCL1Q15111 1095 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CARD16Q5EG05 197 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ARSIQ5FYB1 569 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZC3HC1Q86WB0 502 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 GATAD2AQ86YP4 633 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 FSTL5Q8N475 847 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 HDAC2Q92769 488 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CDKN2AIPNLQ96HQ2 116 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ADGRE3Q9BY15 652 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZNF717Q9BY31 904 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ELOVL2Q9NXB9 296 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 XPR1Q9UBH6 696 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 NEMP2A6NFY4 417 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 NPIPB15A6NHN6 443 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SYCE1LA8MT33 242 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 H2AFYO75367 372 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 LEFTY1O75610 366 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 HOXB8P17481 243 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 OPRD1P41143 372 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ETV3P41162 512 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CHRNEQ04844 493 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SLC12A1Q13621 1099 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 AGKQ53H12 422 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 PAGE2BQ5JRK9 111 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 KIAA0930Q6ICG6 404 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CYP20A1Q6UW02 462 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 DCP2Q8IU60 420 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CEP97Q8IW35 865 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 FRS2Q8WU20 508 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZUFSPQ96AP4 578 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 MAGED4Q96JG8 741 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 MSLNLQ96KJ4 702 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 TSNARE1Q96NA8 513 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 GPR63Q9BZJ6 419 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ATP13A3Q9H7F0 1226 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SMOXQ9NWM0 555 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 FBXO10Q9UK96 956 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 TICRRQ7Z2Z1 1910 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 A8MV72 311 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SDHDO14521 159 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 MTRF1O75570 445 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 PRKACAP17612 351 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZNF140P52738 457 aaPredicted RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 AP1S1P61966 158 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 AAK1Q2M2I8 961 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZCCHC8Q6NZY4 707 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 PLEKHG7Q6ZR37 379 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 PIANPQ8IYJ0 282 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CADM2Q8N3J6 435 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZCCHC7Q8N3Z6 543 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 KDM1BQ8NB78 822 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 HMGCLL1Q8TB92 370 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 CSF3RQ99062 836 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 THG1LQ9NWX6 298 aaKnown RBP14.76□□□□□ -0.05
BRAT1-201ENST00000340611 ZMYM5Q9UJ78 669 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 SARDHQ9UL12 918 aa14.76□□□□□ -0.05
BRAT1-201ENST00000340611 NUMA1Q14980 2115 aa14.75□□□□□ -0.05
BRAT1-201ENST00000340611 DOCK9Q9BZ29 2069 aa14.75□□□□□ -0.05
BRAT1-201ENST00000340611 RGS13O14921 159 aa14.75□□□□□ -0.05
BRAT1-201ENST00000340611 PAPLNO95428 1278 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms