RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 DLG3Q92796 817 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 RIOK2Q9BVS4 552 aaKnown RBP14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 SLC12A9Q9BXP2 914 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 TPSD1Q9BZJ3 242 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 ZCCHC2Q9C0B9 1178 aaKnown RBP14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 SPAG4Q9NPE6 437 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 AIG1Q9NVV5 245 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 SPATA6Q9NWH7 488 aaPredicted RBP14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 GID8Q9NWU2 228 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 ARL15Q9NXU5 204 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 CROTQ9UKG9 612 aa14.84□□□□□ -0.03
TUBB4B-201ENST00000340384 SLC28A1O00337 649 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 OR7A17O14581 309 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 TAPBPO15533 448 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 GPR37L1O60883 481 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SLC34A2O95436 690 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 CAPN1P07384 714 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 PCSK2P16519 638 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 PRDX3P30048 256 aaKnown RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 AVPR2P30518 371 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ACSL1P33121 698 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 CCR3P51677 355 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 KCNK10P57789 538 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 HSPA14Q0VDF9 509 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 MAD2L1Q13257 205 aaPredicted RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 CCNIQ14094 377 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 BOP1Q14137 746 aaKnown RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 FLOT2Q14254 428 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 GRB7Q14451 532 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 TAF11Q15544 211 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 PHKG1Q16816 387 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ZNF423Q2M1K9 1284 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 MAP7D1Q3KQU3 841 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SYTL3Q4VX76 610 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ZFP1Q6P2D0 407 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 USP30Q70CQ3 517 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 DET1Q7L5Y6 550 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 FAM160A2Q8N612 972 aaPredicted RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 DTWD2Q8NBA8 298 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 OR52B6Q8NGF0 335 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 HMGCLL1Q8TB92 370 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 MCOLN3Q8TDD5 553 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SKA2Q8WVK7 121 aaPredicted RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ELMO1Q92556 727 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 GLYATL1Q969I3 302 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ESAMQ96AP7 390 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 AP2M1Q96CW1 435 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 PPP3R2Q96LZ3 170 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 HOPXQ9BPY8 73 aaPredicted RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 NTMT1Q9BV86 223 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SLC29A3Q9BZD2 475 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ADA2Q9NZK5 511 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ZIM2Q9NZV7 527 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SUCOQ9UBS9 1254 aaKnown RBP14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 ZNF225Q9UK10 706 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 SCML1Q9UN30 329 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 LRRC42Q9Y546 428 aa14.83□□□□□ -0.04
TUBB4B-201ENST00000340384 NUMA1Q14980 2115 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 NR5A2O00482 541 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 RGS14O43566 566 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 PLRG1O43660 514 aaKnown RBP14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 BAG2O95816 211 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 GGT5P36269 586 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 ADPRHP54922 357 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 FOXM1Q08050 763 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 TRAF3Q13114 568 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 SPATS1Q496A3 300 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 SAMD4BQ5PRF9 694 aaKnown RBP14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 LETMD1Q6P1Q0 360 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 PAOXQ6QHF9 649 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 IL27RAQ6UWB1 636 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 FAM124AQ86V42 546 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 C1orf210Q8IVY1 113 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 PGBD3Q8N328 593 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 SCAMP4Q969E2 229 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 TMEM79Q9BSE2 394 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 ABCG8Q9H221 673 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 SLC32A1Q9H598 525 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 TMPRSS11EQ9UL52 423 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 ASB1Q9Y576 335 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 GPR45Q9Y5Y3 372 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
TUBB4B-201ENST00000340384 A0A1B0GTL3 188 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 IFRD1O00458 451 aaPredicted RBP14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 FBP2O00757 339 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 HOXA6P31267 233 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 THOP1P52888 689 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 EMX2Q04743 252 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 TRAP1Q12931 704 aaKnown RBP14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 TMEM52BQ4KMG9 183 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 GALNT13Q8IUC8 556 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 ASB11Q8WXH4 323 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 DNAJC9Q8WXX5 260 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 GLMNQ92990 594 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 RAB7BQ96AH8 199 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 COQ10AQ96MF6 247 aa14.81□□□□□ -0.04
TUBB4B-201ENST00000340384 FZD4Q9ULV1 537 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms