RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 CDKL1Q00532 357 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 EMX2Q04743 252 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 TRAP1Q12931 704 aaKnown RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 PRKG2Q13237 762 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 HNRNPA1L2Q32P51 320 aaKnown RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 TTC23LQ6PF05 361 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 LIPIQ6XZB0 460 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 ZNF852Q6ZMS4 543 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 VRK3Q8IV63 474 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 MINDY1Q8N5J2 469 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 BEND7Q8N7W2 519 aaPredicted RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 TERB1Q8NA31 727 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 OR8D1Q8WZ84 308 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 GLYATL1Q969I3 302 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 LRRC58Q96CX6 371 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 SLC45A3Q96JT2 553 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 PPP3R2Q96LZ3 170 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 VPS35Q96QK1 796 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 GPATCH1Q9BRR8 931 aaKnown RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 WRAP53Q9BUR4 548 aaKnown RBP10.82□□□□□ -0.68
LRP1-202ENST00000338962 SLC32A1Q9H598 525 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 DLGAP2Q9P1A6 1054 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 CD300AQ9UGN4 299 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 TRPS1Q9UHF7 1281 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 RNF11Q9Y3C5 154 aa10.82□□□□□ -0.68
LRP1-202ENST00000338962 EDDM13A0A1B0GTR0 161 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 FAM234BA2RU67 622 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 PSMD11O00231 422 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 WNT9AO14904 365 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 KAT7O95251 611 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 CLDN9O95484 217 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 IMPDH2P12268 514 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 HLA-EP13747 358 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 GGT5P36269 586 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 CASP2P42575 452 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 TNFRSF4P43489 277 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 AP1S2P56377 157 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 FOXM1Q08050 763 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 SIGLEC14Q08ET2 396 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 NFYCQ13952 458 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 CAPRIN1Q14444 709 aaKnown RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 ELAVL3Q14576 367 aaKnown RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 IMPG1Q17R60 797 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 GRAMD1BQ3KR37 738 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 SYTL3Q4VX76 610 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 TIGD2Q4W5G0 525 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 FBXL19Q6PCT2 694 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 NEK10Q6ZWH5 1172 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 LRRC70Q7Z2Q7 622 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 TECPR1Q7Z6L1 1165 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 RAVER1Q8IY67 606 aaKnown RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 PROKR1Q8TCW9 393 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 MCOLN3Q8TDD5 553 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 NELL2Q99435 816 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 SLC52A3Q9NQ40 469 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 ABCD2Q9UBJ2 740 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 LEF1Q9UJU2 399 aaPredicted RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 FBXL21Q9UKT6 434 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 ZNF490Q9ULM2 529 aaPredicted RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 POLR3HQ9Y535 204 aaPredicted RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
LRP1-202ENST00000338962 PLXNA2O75051 1894 aa10.81□□□□□ -0.68
LRP1-202ENST00000338962 DYTNA2CJ06 578 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 H0Y858 1186 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 GFYI3L273 518 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 FXYD1O00168 92 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 NME4O00746 187 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 SLC16A5O15375 505 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 SGTAO43765 313 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 ATG13O75143 517 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 EEDO75530 441 aaKnown RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 WDR47O94967 919 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 KRT6AP02538 564 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 KRT6BP04259 564 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 G6PDP11413 515 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 ITGB7P26010 798 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 KRT6CP48668 564 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 RPL38P63173 70 aaKnown RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 GRSF1Q12849 480 aaKnown RBP eCLIP10.8□□□□□ -0.68
LRP1-202ENST00000338962 MAD2L1Q13257 205 aaPredicted RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 CCINQ13939 588 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 RFTN2Q52LD8 501 aaPredicted RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 SGO1Q5FBB7 561 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 ZNF648Q5T619 568 aaPredicted RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 IL23RQ5VWK5 629 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 CYP20A1Q6UW02 462 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 RBM12BQ8IXT5 1001 aaKnown RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 NRSN1Q8IZ57 195 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 PIP4K2CQ8TBX8 421 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 ZFAND2BQ8WV99 257 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 EZH1Q92800 747 aaPredicted RBP10.8□□□□□ -0.68
LRP1-202ENST00000338962 TMEM159Q96B96 161 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 CA14Q9ULX7 337 aa10.8□□□□□ -0.68
LRP1-202ENST00000338962 COL4A2P08572 1712 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms