RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 NTN4Q9HB63 628 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 PAK1IP1Q9NWT1 392 aaPredicted RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 SARDHQ9UL12 918 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 FGF4P08620 206 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ADARB1P78563 741 aaKnown RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 GSTM4Q03013 218 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 IL10RBQ08334 325 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 UBE2UQ5VVX9 321 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 OR5K1Q8NHB7 308 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 CHPT1Q8WUD6 406 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 BRI3BPQ8WY22 251 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 HDAC2Q92769 488 aaKnown RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 MAL2Q969L2 176 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 Q96MT0 163 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF583Q96ND8 569 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 RTP3Q9BQQ7 232 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ATP13A3Q9H7F0 1226 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ZIM2Q9NZV7 527 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF225Q9UK10 706 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 LRRC37AA6NMS7 1700 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 MED26O95402 600 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 MATN4O95460 622 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 GSTM2P28161 218 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 SERINC3Q13530 473 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 CLCA4Q14CN2 919 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 NFE2Q16621 373 aaPredicted RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 PHKG1Q16816 387 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 S100ZQ8WXG8 99 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 KCNN1Q92952 543 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 KAT8Q9H7Z6 458 aaKnown RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 TLR6Q9Y2C9 796 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 H0YAE9 185 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 IDH3BO43837 385 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ITGALP20701 1170 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 INAVAQ3KP66 663 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ADAMTSL2Q86TH1 951 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 CACTIN-AS1Q8N1I8 211 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 PGAP3Q96FM1 320 aaPredicted RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ABCB9Q9NP78 766 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 C1orf109Q9NX04 203 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ERVK13-1Q9NX77 482 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 GTF2IRD1Q9UHL9 959 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 ABCG2Q9UNQ0 655 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 VPS9D1Q9Y2B5 631 aa13.84□□□□□ -0.19
PCDH8-201ENST00000338862 FAM32AQ9Y421 112 aaKnown RBP13.84□□□□□ -0.19
PCDH8-201ENST00000338862 GGT1P19440 569 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 RPL9P32969 192 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 DEFA1P59665 94 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 DEFA3P59666 94 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 ILF2Q12905 390 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 GANABQ14697 944 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 ANKRD13BQ86YJ7 626 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 SVOPQ8N4V2 548 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 ST13P5Q8NFI4 369 aaPredicted RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 PMF1-BGLAPU3KQ54 211 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 LOC110117498-PIK3R3F6TDL0 507 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 K7ERQ8 282 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 IFRD1O00458 451 aaPredicted RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 AQP9O43315 295 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 EPN2O95208 641 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 WEE1P30291 646 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 INPP1P49441 399 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF605Q86T29 641 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 SLC16A10Q8TF71 515 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 CITED4Q96RK1 184 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 IL4I1Q96RQ9 567 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 MRM3Q9HC36 420 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 AASDHPPTQ9NRN7 309 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 GIT1Q9Y2X7 761 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 TNPO3Q9Y5L0 923 aaKnown RBP13.83□□□□□ -0.2
PCDH8-201ENST00000338862 LTBP1Q14766 1721 aa13.83□□□□□ -0.2
PCDH8-201ENST00000338862 FPGTO14772 594 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 MMP2P08253 660 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 FAM83FQ8NEG4 500 aaPredicted RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 GPRC5BQ9NZH0 403 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 H3BN98 237 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 STK16O75716 305 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 RPIAP49247 311 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms