RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 MATN2O00339 956 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 CEP104O60308 925 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 CNOT3O75175 753 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 AVILO75366 819 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 FGGP02679 453 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 GSTM1P09488 218 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 RAB40ALP0C0E4 278 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 MGAT1P26572 445 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 AOAHP28039 575 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 SHMT2P34897 504 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 PRAMEP78395 509 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 GSTM4Q03013 218 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 LYPLAL1Q5VWZ2 237 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 HOOK3Q86VS8 718 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC22A15Q8IZD6 547 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 THAP4Q8WY91 577 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 TRIM56Q9BRZ2 755 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 MENTQ9BUN1 341 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC25A23Q9BV35 468 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 FRMD8P1Q9BZ68 369 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 FANCEQ9HB96 536 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 CATSPERZQ9NTU4 200 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 LUZP4Q9P127 313 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 GALPQ9UBC7 116 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 POLG2Q9UHN1 485 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 TTC7AQ9ULT0 858 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 UBR5O95071 2799 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 HECTD1Q9ULT8 2610 aa12.89□□□□□ -0.35
NUDCD3-201ENST00000338427 A0A0J9YY10 115 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 MAP3K7O43318 606 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 OR2B3O76000 313 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 TMEM63AO94886 807 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 FMO4P31512 558 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 OTX2P32243 289 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 YBX1P67809 324 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 KYNUQ16719 465 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 PPHLN1Q8NEY8 458 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 FDCSPQ8NFU4 85 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 N4BP2L2Q92802 583 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 MIB2Q96AX9 1013 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 FAM136AQ96C01 138 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 MFSD3Q96ES6 412 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 TCTN2Q96GX1 697 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 NUDT9Q9BW91 350 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 P2RY12Q9H244 342 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 SYTL2Q9HCH5 934 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 TREX1Q9NSU2 369 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 SYBUQ9NX95 663 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 STOX2Q9P2F5 926 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 FER1L5A0AVI2 2057 aa12.88□□□□□ -0.35
NUDCD3-201ENST00000338427 QSOX1O00391 747 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 VAPBO95292 243 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MSL3P1P0C860 447 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MAGP20916 626 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 ALAS2P22557 587 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MCM3P25205 808 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 ARNTP27540 789 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 PKLRP30613 574 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 BDKRB1P46663 353 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 NPY2RP49146 381 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 VPS41P49754 854 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 NCF4Q15080 339 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 PTRHD1Q6GMV3 140 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 GPR135Q8IZ08 494 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MS4A14Q96JA4 679 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 GBP5Q96PP8 586 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 TTC1Q99614 292 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 OR6C2Q9NZP2 312 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 FLNCQ14315 2725 aa12.87□□□□□ -0.35
NUDCD3-201ENST00000338427 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 TTLL8A6PVC2 850 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PRICKLE3O43900 615 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 NRP2O60462 931 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 NDUFS3O75489 264 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 AGXTP21549 392 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms