RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FRYLO94915 3013 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 PIPSLA2A3N6 862 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 PCNX2A6NKB5 2137 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 SMIM23A6NLE4 172 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ARHGEF33A8MVX0 844 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 C2orf74A8MZ97 194 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 MYO1CO00159 1063 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 BTN3A1O00481 513 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CAPN5O15484 640 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CDH16O75309 829 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 SLC35E2BP0CK96 405 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 COL6A2P12110 1019 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 POLR2CP19387 275 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 GCAP28676 217 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 SLCO1A2P46721 670 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CAPZBP47756 277 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 INHBCP55103 352 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 AP1S2P56377 157 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 TRA2AQ13595 282 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CSHL1Q14406 222 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 HES3Q5TGS1 186 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ANKS6Q68DC2 871 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 KLC3Q6P597 504 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 TMPRSS7Q7RTY8 843 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CROCCP2Q86T23 111 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ADAMTSL2Q86TH1 951 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 RASGRP3Q8IV61 690 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 OR2L8Q8NGY9 312 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 STAG3L4Q8TBR4 150 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CD180Q99467 661 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 STRADBQ9C0K7 418 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 OGFRQ9NZT2 677 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 TBK1Q9UHD2 729 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 PLAGL1Q9UM63 463 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 ICKQ9UPZ9 632 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 PLAAQ9Y263 795 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 DMDP11532 3685 aa11.55□□□□□ -0.56
SPTLC1-202ENST00000337841 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 GSAPA4D1B5 854 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ISM1B1AKI9 464 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 D6RAR5 112 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CDC7O00311 574 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 BTN3A3O00478 584 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 TOX3O15405 576 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 MAP3K7O43318 606 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CSO75390 466 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 WISP3O95389 354 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ALDOAP04075 364 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CHRM5P08912 532 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 HOXB3P14651 431 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CD1DP15813 335 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 KRT15P19012 456 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 PKLRP30613 574 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CFHR1Q03591 330 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ZFP36L1Q07352 338 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 FOXC1Q12948 553 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 GRB7Q14451 532 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 KIR2DS3Q14952 304 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CYP2A13Q16696 494 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ISXQ2M1V0 245 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CCSMST1Q4G0I0 132 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 SNAP47Q5SQN1 464 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 PHF19Q5T6S3 580 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 FBXO38Q6PIJ6 1188 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 FRA10AC1Q70Z53 315 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 SPATA6LQ8N4H0 392 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 OR2W6PQ8NHA6 318 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 HMGCLL1Q8TB92 370 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ACMSDQ8TDX5 336 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ATL1Q8WXF7 558 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 SMPDL3AQ92484 453 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 RSC1A1Q92681 617 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ISL2Q96A47 359 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 KIAA1191Q96A73 305 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 NXNL1Q96CM4 212 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 TGM7Q96PF1 710 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 NUDT22Q9BRQ3 303 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 TMEM109Q9BVC6 243 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ARL15Q9NXU5 204 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 ACTR10Q9NZ32 417 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
SPTLC1-202ENST00000337841 CIDEBQ9UHD4 219 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms