RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR4F6Q8NGB9 312 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 OR9A1PQ8NGU1 263 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 MAGEC3Q8TD91 643 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 TWIST2Q8WVJ9 160 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 PDZK1P1A8MUH7 402 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 METTL12A8MUP2 240 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 K7ESF4 209 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 TOR1BO14657 336 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 TNFRSF10CO14798 259 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 MAP3K13O43283 966 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 CCDC22O60826 627 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 RASGRP1O95267 797 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 THEGLP0DJG4 465 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 UROSP10746 265 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 IMPA1P29218 277 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SIGLEC14Q08ET2 396 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 LSM12Q3MHD2 195 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 USP39Q53GS9 565 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 MYLK4Q86YV6 388 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 DDIASQ8IXT1 998 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SLC22A18ASQ8N1D0 253 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 METTL6Q8TCB7 284 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SPACA7Q96KW9 195 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 C12orf66Q96MD2 445 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SLC6A18Q96N87 628 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 MEAF6Q9HAF1 191 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 ARMCX1Q9P291 453 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 PNMA8BQ9ULN7 279 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 STK38LQ9Y2H1 464 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 ST14Q9Y5Y6 855 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SLCO1B1Q9Y6L6 691 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SDHDO14521 159 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SERPINA6P08185 405 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 TRAF3Q13114 568 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 TSTA3Q13630 321 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 PTK2BQ14289 1009 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 ALG11Q2TAA5 492 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 SPDYAQ5MJ70 313 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 CWF19L1Q69YN2 538 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 CAPRIN2Q6IMN6 1127 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 YTHDF3Q7Z739 585 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 SYTL1Q8IYJ3 562 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 ZNF480Q8WV37 535 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 RAD51AP1Q96B01 352 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 INSM2Q96T92 566 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 ORAI3Q9BRQ5 295 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 PRDM8Q9NQV8 689 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 DNAJC11Q9NVH1 559 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 INTS7Q9NVH2 962 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 SPATA6Q9NWH7 488 aaPredicted RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 PLAGL1Q9UM63 463 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 G3BP2Q9UN86 482 aaKnown RBP14.29□□□□□ -0.12
CBX3-201ENST00000337620 PTGDR2Q9Y5Y4 395 aa14.29□□□□□ -0.12
CBX3-201ENST00000337620 ATP6AP2A0A1C7CYW4 349 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 MYO1CO00159 1063 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 PIP5K1BO14986 540 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 ATP6AP2O75787 350 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 CHEK2O96017 543 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 RPN2P04844 631 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 CAPN1P07384 714 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 LINC00032P0C843 101 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 AK4P27144 223 aaPredicted RBP14.28□□□□□ -0.12
CBX3-201ENST00000337620 MAOBP27338 520 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 CTBSQ01459 385 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 DMWDQ09019 674 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 DUS1LQ6P1R4 473 aaKnown RBP14.28□□□□□ -0.12
CBX3-201ENST00000337620 THOC6Q86W42 341 aaKnown RBP14.28□□□□□ -0.12
CBX3-201ENST00000337620 DCUN1D3Q8IWE4 304 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 LMNTD1Q8N9Z9 388 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 CADM4Q8NFZ8 388 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 KLHDC7BQ96G42 594 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 FERD3LQ96RJ6 166 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 TRIT1Q9H3H1 467 aaKnown RBP14.28□□□□□ -0.12
CBX3-201ENST00000337620 IMP3Q9NV31 184 aaKnown RBP14.28□□□□□ -0.12
CBX3-201ENST00000337620 DLGAP2Q9P1A6 1054 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
CBX3-201ENST00000337620 ANKRD65E5RJM6 399 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 HGFP14210 728 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 EPORP19235 508 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 CD27P26842 260 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 INHBCP55103 352 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 UBAP2LQ14157 1087 aaKnown RBP14.27□□□□□ -0.12
CBX3-201ENST00000337620 CLCA4Q14CN2 919 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 GALNTL6Q49A17 601 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 TCHHL1Q5QJ38 904 aaPredicted RBP14.27□□□□□ -0.12
CBX3-201ENST00000337620 TSSK4Q6SA08 328 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 SCIMPQ6UWF3 145 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 CEP70Q8NHQ1 597 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 CCL4L1Q8NHW4 92 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 EDAQ92838 391 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.12
CBX3-201ENST00000337620 C3orf30Q96M34 536 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 IER2Q9BTL4 223 aa14.27□□□□□ -0.12
CBX3-201ENST00000337620 CCDC28BQ9BUN5 200 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms