RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ATXN1P54253 815 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 ADARP55265 1226 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 RBBP4Q09028 425 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 DUS1LQ6P1R4 473 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.04□□□□□ -0.48
FN1-202ENST00000336916 FSTL5Q8N475 847 aaPredicted RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 EXOSC8Q96B26 276 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 SIPA1Q96FS4 1042 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SFXN1Q9H9B4 322 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 MAGEE1Q9HCI5 957 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 E2F3O00716 465 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 NUAK1O60285 661 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SYPP08247 313 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SPATA31D3P0C874 917 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CCL5P13501 91 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SF3B4Q15427 424 aaKnown RBP eCLIP12.04□□□□□ -0.482e-6■■■■□ 25.5
FN1-202ENST00000336916 DLG2Q15700 870 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 PLET1Q6UQ28 207 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SPATA31D4Q6ZUB0 917 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 APOLD1Q96LR9 279 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CNTN3Q9P232 1028 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 B4GALT7Q9UBV7 327 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CNTN6Q9UQ52 1028 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 TMEM5Q9Y2B1 443 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 MATN2O00339 956 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 PIGRP01833 764 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 DECR1Q16698 335 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 FBXO43Q4G163 708 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ZSWIM3Q96MP5 696 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 EVLQ9UI08 416 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 UPK3BL1B0FP48 263 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 UPK3BL2E5RIL1 263 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CBX6O95503 412 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ERCC1P07992 297 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 DENND5AQ6IQ26 1287 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 OR6K2Q8NGY2 324 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 FCRL5Q96RD9 977 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CD248Q9HCU0 757 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 MRPS7Q9Y2R9 242 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 PRR5-ARHGAP8B1AHC4 643 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 TPD52L2O43399 206 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 ITIH1P19827 911 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 HSD11B1P28845 292 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CCR10P46092 362 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 GBX2P52951 348 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 C9orf43Q8TAL5 461 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 LNX1Q8TBB1 728 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 UFD1Q92890 307 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 C1GALT1C1Q96EU7 318 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 JSRP1Q96MG2 331 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 SMPD3Q9NY59 655 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 PLOD3O60568 738 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 SLC1A2P43004 574 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 SERINC3Q13530 473 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 TMEM63BQ5T3F8 832 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 OSTF1Q92882 214 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 MKS1Q9NXB0 559 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 UBAP1Q9NZ09 502 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 OAS1P00973 400 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 RPL10P27635 214 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 VIPR1P32241 457 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 CDH13P55290 713 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ERVK-8P63133 956 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 PRKCZQ05513 592 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 SYT16Q17RD7 645 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 IFI44LQ53G44 452 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 DDI2Q5TDH0 399 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ARL9Q6T311 187 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CTU1Q7Z7A3 348 aaKnown RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 AP2A2O94973 939 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CLUP10909 449 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 RAB15P59190 212 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 PHF19Q5T6S3 580 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 OR56A1Q8NGH5 318 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 ADAMTS18Q8TE60 1221 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 HMGB4Q8WW32 186 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 TMEM234Q8WY98 164 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 RCN3Q96D15 328 aa12.03□□□□□ -0.48
FN1-202ENST00000336916 CENPNQ96H22 339 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 POLR3BQ9NW08 1133 aaPredicted RBP12.03□□□□□ -0.48
FN1-202ENST00000336916 FLRT1Q9NZU1 646 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms