RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PGLSO95336 258 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 MTHFD2P13995 350 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ZNF26P17031 533 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 HNF1BP35680 557 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CAPGP40121 348 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 MASP1P48740 699 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KPNA1P52294 538 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 ELAVL2Q12926 359 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 RAB39AQ14964 217 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SETMARQ53H47 684 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 C17orf99Q6UX52 265 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 Q6ZPB1 254 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 ADHFE1Q8IWW8 467 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 COLGALT2Q8IYK4 626 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KIAA2013Q8IYS2 634 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 MARVELD2Q8N4S9 558 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 LKAAEAR1Q8TD35 194 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KAT2AQ92830 837 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KCNC2Q96PR1 638 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 YIPF4Q9BSR8 244 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 INPP5KQ9BT40 448 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ZNF556Q9HAH1 456 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CSNK1G1Q9HCP0 422 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ACTR3BQ9P1U1 418 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 C3orf18Q9UK00 162 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CLEC4EQ9ULY5 219 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 YIPF1Q9Y548 306 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KNTC1P50748 2209 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 FPGTO14772 594 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 LATO43561 262 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CLDN9O95484 217 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SEC24AO95486 1093 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CXCL14O95715 111 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TRBC1P01850 177 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ATF6P18850 670 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 FSHRP23945 695 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 IGFBP5P24593 272 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TACR1P25103 407 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ADRA1AP35348 466 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RPS14P62263 151 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 XIAPP98170 497 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TLE2Q04725 743 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SMN1Q16637 294 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 ATP13A5Q4VNC0 1218 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RAET1GQ6H3X3 334 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 HMBOX1Q6NT76 420 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 USP45Q70EL2 814 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RRM2BQ7LG56 351 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 THAP5Q7Z6K1 395 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 CLECL1Q8IZS7 167 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 OR8H2Q8N162 312 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TP53INP1Q96A56 240 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ISOC1Q96CN7 298 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RANBP9Q96S59 729 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 IGFLR1Q9H665 355 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SGK2Q9HBY8 427 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 KRT84Q9NSB2 600 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 C5AR2Q9P296 337 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SLC25A13Q9UJS0 675 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SPEGQ15772 3267 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ZNF840PA6NDX5 716 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 HAS3O00219 553 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TNFRSF10BO14763 440 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 VILLO15195 856 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ZNF623O75123 536 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 PTGER3P43115 390 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RPS3AP61247 264 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 SNRPD1P62314 119 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 CACNG1Q06432 222 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 LSAMPQ13449 338 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ADRM1Q16186 407 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TMEM236Q5W0B7 351 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 SULT1C3Q6IMI6 304 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TNFAIP8L2Q6P589 184 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 ROPN1LQ96C74 230 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 PGAP3Q96FM1 320 aaPredicted RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 FUBP3Q96I24 572 aaKnown RBP eCLIP8.05□□□□□ -1.12
HPS4-201ENST00000336873 UBXN10Q96LJ8 280 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 IL4I1Q96RQ9 567 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 OR51B5Q9H339 312 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 RAD21L1Q9H4I0 556 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 DUS2Q9NX74 493 aaKnown RBP8.05□□□□□ -1.12
HPS4-201ENST00000336873 ACSL6Q9UKU0 697 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ASF1AQ9Y294 204 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 WNT6Q9Y6F9 365 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 PRSS51A0A1B0GVH4 220 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 A0A1W2PQ45 241 aaPredicted RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 A0A1W2PQY0 241 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PDZK1P1A8MUH7 402 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PSMD11O00231 422 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ESR1P03372 595 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ANXA4P09525 319 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms