RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PIK3R1P27986 724 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 SLBPQ14493 270 aaKnown RBP eCLIP9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 IL23RQ5VWK5 629 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 CD244Q9BZW8 370 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 CIDEBQ9UHD4 219 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 SNX13Q9Y5W8 968 aa9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
FNDC3B-201ENST00000336824 C2orf74A8MZ97 194 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 AGPSO00116 658 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SCAMP1O15126 338 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TPST1O60507 370 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 S1PR4O95977 384 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 KLKB1P03952 638 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ATP6V1B2P21281 511 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PRDX6P30041 224 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ERFP50548 548 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 UBAP2LQ14157 1087 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 AGTRAPQ6RW13 159 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TEX26Q8N6G2 289 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CNTD1Q8N815 330 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SLC5A11Q8WWX8 675 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PTCD3Q96EY7 689 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 APOBEC3BQ9UH17 382 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SLC22A14Q9Y267 594 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 NUDT14O95848 222 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SRSF11Q05519 484 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SLC9A5Q14940 896 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TCHHL1Q5QJ38 904 aaPredicted RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 C9orf64Q5T6V5 341 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 GCNT7Q6ZNI0 430 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 P3H2Q8IVL5 708 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TP53INP2Q8IXH6 220 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TRPV3Q8NET8 790 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TSSK3Q96PN8 268 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 MUC13Q9H3R2 512 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 VPS29Q9UBQ0 182 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 COPS7AQ9UBW8 275 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 MATN2O00339 956 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CBX6O95503 412 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 RPS3P23396 243 aaKnown RBP eCLIP9.1□□□□□ -0.952e-8■■□□□ 13
FNDC3B-201ENST00000336824 SMIM11AP58511 58 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 EGFLAMQ63HQ2 1017 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PROSER1Q86XN7 944 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ZBED6CLQ96FA7 236 aaPredicted RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 DTD2Q96FN9 168 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 MRPL48Q96GC5 212 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 NDC1Q9BTX1 674 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ADNPQ9H2P0 1102 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SIT1Q9Y3P8 196 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 EBLN1P0CF75 366 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 LRRC36Q1X8D7 754 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PPP4R4Q6NUP7 873 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 NUDT13Q86X67 352 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ADHFE1Q8IWW8 467 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 KRT84Q9NSB2 600 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 DMTF1Q9Y222 760 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 C9J4A7 227 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 IGLV3-25P01717 112 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 IL6P05231 212 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 MYCLP1P12525 358 aaPredicted RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ZNF8P17098 575 aaPredicted RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 AGXTP21549 392 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CD6P30203 668 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 PSME3P61289 254 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 SEMA3BQ13214 749 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 C7orf57Q8NEG2 295 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CLIP3Q96DZ5 547 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TRPM6Q9BX84 2022 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 OCM2P0CE71 109 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 OCMP0CE72 109 aaPredicted RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 CSTF2P33240 577 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■■■■ 29
FNDC3B-201ENST00000336824 SLC6A11P48066 632 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 FOXM1Q08050 763 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 UNC5DQ6UXZ4 953 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 ALYREFQ86V81 257 aaKnown RBP9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 TMEM145Q8NBT3 493 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 STRADBQ9C0K7 418 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 NCDNQ9UBB6 729 aa9.1□□□□□ -0.95
FNDC3B-201ENST00000336824 NPIPB15A6NHN6 443 aaPredicted RBP9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 PIP5K1BO14986 540 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 LDLRP01130 860 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 ERVK-8P63133 956 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 MACC1Q6ZN28 852 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 GALNT4Q8N4A0 578 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 DNAJB14Q8TBM8 379 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 RBM18Q96H35 190 aaKnown RBP9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 TBCDQ9BTW9 1192 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 SLC9A8Q9Y2E8 581 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 LRRC37A2A6NM11 1700 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 UBXN7O94888 489 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 BDKRB1P46663 353 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 OCA2Q04671 838 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 ERICH5Q6P6B1 374 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 GALNT7Q86SF2 657 aa9.09□□□□□ -0.95
FNDC3B-201ENST00000336824 TSPAN33Q86UF1 283 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms