RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PPP3R2Q96LZ3 170 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ARHGAP39Q9C0H5 1083 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 RAD21L1Q9H4I0 556 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC52A3Q9NQ40 469 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CCDC177Q9NQR7 707 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 PDE10AQ9Y233 779 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 XYLBO75191 536 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRLP01236 227 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 FTH1P02794 183 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ESR1P03372 595 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 C7P10643 843 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ALDH4A1P30038 563 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 PTGER3P43115 390 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 SEPHS1P49903 392 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CDH4P55283 916 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CYP4F3Q08477 520 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 KCNAB2Q13303 367 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 LRRC8DQ7L1W4 858 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 DET1Q7L5Y6 550 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 RTN4RL1Q86UN2 441 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 COLGALT2Q8IYK4 626 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 TRIB2Q92519 343 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF486Q96H40 463 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 TSSK3Q96PN8 268 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 TRIB3Q96RU7 358 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 FAM126AQ9BYI3 521 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 MBL2P11226 248 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 AGXTP21549 392 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 CXCR2P25025 360 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 DCKP27707 260 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 WEE1P30291 646 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 ADARB1P78563 741 aaKnown RBP16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 SNAP47Q5SQN1 464 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 IRAK1BP1Q5VVH5 260 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 DLEU7Q6UYE1 221 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC22A16Q86VW1 577 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 SERPINA9Q86WD7 417 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 NTN4Q9HB63 628 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 NUDT4Q9NZJ9 180 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 GABRQQ9UN88 632 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 H3BUI4 141 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 CXCR6O00574 342 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 CLDN11O75508 207 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRAMEF1O95521 474 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 TSPAN12O95859 305 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 BMPR1AP36894 532 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 RAB15P59190 212 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 RSBN1Q5VWQ0 802 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 GATAD2AQ86YP4 633 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 EFHD2Q96C19 240 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 RIBC2Q9H4K1 309 aa16.17■□□□□ 0.18
CDC42EP4-201ENST00000335793 A8MV72 311 aaPredicted RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 H0YAE9 185 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRAMEF12O95522 483 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ALPLP05186 524 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ELNP15502 786 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 GNPDA1P46926 289 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 SGSHP51688 502 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 TUBA1BP68363 451 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 OXA1LQ15070 435 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 MBOAT1Q6ZNC8 495 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 TUBA1AQ71U36 451 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 AKAP14Q86UN6 197 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FRS2Q8WU20 508 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 TADA1Q96BN2 335 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 OMA1Q96E52 524 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF583Q96ND8 569 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 AASSQ9UDR5 926 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 M0R3G1 203 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 KDELR3O43731 214 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 XPNPEP2O43895 674 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PGRP06401 933 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 INHBBP09529 407 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRR35P0CG20 571 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 MSH3P20585 1137 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 GKP32189 559 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FPGSQ05932 587 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 NEK5Q6P3R8 708 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FATE1Q969F0 183 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 PDFQ9HBH1 243 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FAM118AQ9NWS6 357 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 DNAJB9Q9UBS3 223 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 C3orf18Q9UK00 162 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ILVBLA1L0T0 632 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC38A8A6NNN8 435 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF701M0R085 212 aaPredicted RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ABCB7O75027 752 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FKBP9O95302 570 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 SERPINA1P01009 418 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 GGT1P19440 569 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FKBP1BP68106 108 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 SPATS1Q496A3 300 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 RSPO2Q6UXX9 243 aaPredicted RBP16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 FKBP9P1Q75LS8 142 aa16.16■□□□□ 0.18
CDC42EP4-201ENST00000335793 ADHFE1Q8IWW8 467 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms