RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ZNF839A8K0R7 811 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 E9PQ18 207 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PEX12O00623 359 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DHHO43323 396 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PLIN1O60240 522 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PFKFB2O60825 505 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ITGA10O75578 1167 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MTA2O94776 668 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 INMTO95050 263 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LYPD3O95274 346 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 OXTP01178 125 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MBL2P11226 248 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF23P17027 643 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DDX5P17844 614 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CSKP41240 450 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PDE1AP54750 535 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TMPRSS15P98073 1019 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ABRQ12979 859 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 IGFBP7Q16270 282 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DUOXA2Q1HG44 320 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MUM1Q2TAK8 710 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZACNQ401N2 412 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 AWAT1Q58HT5 328 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLC25A53Q5H9E4 307 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NCMAPQ5T1S8 102 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 HENMT1Q5T8I9 393 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 RNF20Q5VTR2 975 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LIPIQ6XZB0 460 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CLEC20AQ6ZU45 233 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLFN11Q7Z7L1 901 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ACOT1Q86TX2 421 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC6Q86X45 466 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF761Q86XN6 746 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LAX1Q8IWV1 398 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 GPD1LQ8N335 351 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NAT16Q8N8M0 369 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 C1orf127Q8N9H9 656 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LINC01356Q8N9X3 169 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MORN4Q8NDC4 146 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 OR6K3Q8NGY3 331 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ING5Q8WYH8 240 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 FBXO32Q969P5 355 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CTHRC1Q96CG8 243 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TM4SF19Q96DZ7 209 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TRMT61AQ96FX7 289 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MED15Q96RN5 788 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 RBBP8Q99708 897 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PKP2Q99959 881 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 POLDIP3Q9BY77 421 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CDCP1Q9H5V8 836 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF703Q9H7S9 590 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 YY1AP1Q9H869 796 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TRPC7Q9HCX4 862 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TPSG1Q9NRR2 321 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SPATS2LQ9NUQ6 558 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 WRAP73Q9P2S5 460 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LHX3Q9UBR4 397 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLC12A6Q9UHW9 1150 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PLCL2Q9UPR0 1127 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MTMR7Q9Y216 660 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NBASA2RRP1 2371 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 GXYLT2A0PJZ3 443 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 GOLGA6L4A6NEF3 574 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 GOLGA6L9A6NEM1 432 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MAGEB17A8MXT2 336 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CENPBD1B2RD01 187 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TAPBPO15533 448 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 KLRC4O43908 158 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PLATP00750 562 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLC4A1P02730 911 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SP1P08047 785 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ACP2P11117 423 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NEFHP12036 1026 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 RARGP13631 454 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CNR1P21554 472 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TNFSF9P41273 254 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ASPAP45381 313 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MAP2K6P52564 334 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 YWHAGP61981 247 aaKnown RBP eCLIP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DCDP81605 110 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF33BQ06732 778 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SPAG1Q07617 926 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CNTN1Q12860 1018 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TRDNQ13061 729 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DNAJC3Q13217 504 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 KCNAB1Q14722 419 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC14Q15048 493 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 IRF4Q15306 451 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CYP2A13Q16696 494 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 RTN1Q16799 776 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SWI5Q1ZZU3 235 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 C2orf68Q2NKX9 166 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TOR1AIP1Q5JTV8 583 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC66Q68CR7 880 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 JADE1Q6IE81 842 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ACAD10Q6JQN1 1059 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SYDE1Q6ZW31 735 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 INTS8Q75QN2 995 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NDUFA11Q86Y39 141 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 C1QL4Q86Z23 238 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms