RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MKS1Q9NXB0 559 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 ICKQ9UPZ9 632 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 RNF215Q9Y6U7 377 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 RP1P56715 2156 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 C4orf47A7E2U8 309 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 A8MT66 165 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 HMGB1P1B2RPK0 211 aaPredicted RBP16.04■□□□□ 0.16
SHOX-201ENST00000334060 IFRD1O00458 451 aaPredicted RBP16.04■□□□□ 0.16
SHOX-201ENST00000334060 KERAO60938 352 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 IMPA1P29218 277 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 ATP5DP30049 168 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 C6orf132Q5T0Z8 1188 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 NKAIN2Q5VXU1 208 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 WASH2PQ6VEQ5 465 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 DCBLD1Q8N8Z6 715 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 ZNF480Q8WV37 535 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
SHOX-201ENST00000334060 MRPL46Q9H2W6 279 aaKnown RBP16.04■□□□□ 0.16
SHOX-201ENST00000334060 WASH6PQ9NQA3 447 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 SPHK1Q9NYA1 384 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 ACTL7BQ9Y614 415 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 PRPF4O43172 522 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHOX-201ENST00000334060 CER1O95813 267 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 SYPP08247 313 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 CD59P13987 128 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 CHN1P15882 459 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 PEBP1P30086 187 aaKnown RBP16.03■□□□□ 0.16
SHOX-201ENST00000334060 ALDH3A1P30838 453 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 CCT5P48643 541 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
SHOX-201ENST00000334060 ATP6V0D1P61421 351 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 HHEXQ03014 270 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 PERM1Q5SV97 790 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 NEK10Q6ZWH5 1172 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 C17orf82Q86X59 251 aaPredicted RBP16.03■□□□□ 0.16
SHOX-201ENST00000334060 CCDC63Q8NA47 563 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 OR4E2Q8NGC2 313 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 ALKBH8Q96BT7 664 aaKnown RBP16.03■□□□□ 0.16
SHOX-201ENST00000334060 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 PARVBQ9HBI1 364 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 ARL15Q9NXU5 204 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 STOX2Q9P2F5 926 aaPredicted RBP16.03■□□□□ 0.16
SHOX-201ENST00000334060 OARD1Q9Y530 152 aa16.03■□□□□ 0.16
SHOX-201ENST00000334060 AGRPO00253 132 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 SH3BP5O60239 455 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 COL6A2P12110 1019 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 NR1D1P20393 614 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 SLC26A3P40879 764 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 HSPA7P48741 367 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 TSTA3Q13630 321 aaPredicted RBP16.02■□□□□ 0.16
SHOX-201ENST00000334060 OGFOD3Q6PK18 319 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 CROCCP2Q86T23 111 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 PTGR2Q8N8N7 351 aaPredicted RBP16.02■□□□□ 0.16
SHOX-201ENST00000334060 RSC1A1Q92681 617 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 RHBDF1Q96CC6 855 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 MRPL57Q9BQC6 102 aaKnown RBP16.02■□□□□ 0.16
SHOX-201ENST00000334060 PITPNM3Q9BZ71 974 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 CD274Q9NZQ7 290 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 SENP1Q9P0U3 644 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 COPG2Q9UBF2 871 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.16
SHOX-201ENST00000334060 BTN3A3O00478 584 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 SNRNP200O75643 2136 aaKnown RBP16.02■□□□□ 0.15
SHOX-201ENST00000334060 DHRS4L1P0CG22 281 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 TYRP1P17643 537 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 HALP42357 657 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 CLDN6P56747 220 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 PPP2R2AP63151 447 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 CSRP2Q16527 193 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 FRA10AC1Q70Z53 315 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 RABEPKQ7Z6M1 372 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 LRRC56Q8IYG6 542 aaPredicted RBP16.02■□□□□ 0.15
SHOX-201ENST00000334060 OR4C6Q8NH72 309 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 STAG3L4Q8TBR4 150 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 EGFL8Q99944 293 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 ACAT2Q9BWD1 397 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 SHCBP1LQ9BZQ2 653 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 C20orf27Q9GZN8 174 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 TNFRSF12AQ9NP84 129 aa16.02■□□□□ 0.15
SHOX-201ENST00000334060 ASPMQ8IZT6 3477 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 FAM186AA6NE01 2351 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 PRAMEF4O60810 478 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 C8GP07360 202 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 XRCC1P18887 633 aaPredicted RBP16.01■□□□□ 0.15
SHOX-201ENST00000334060 CDH13P55290 713 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 TSNAXIP1Q2TAA8 658 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 C14orf28Q4W4Y0 310 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
SHOX-201ENST00000334060 PRAMEF9Q5VWM5 478 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 IL27RAQ6UWB1 636 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 UNC5DQ6UXZ4 953 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 ADAMTSL2Q86TH1 951 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 DCUN1D3Q8IWE4 304 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 Q8N9G6 341 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms