RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 NDNQ99608 321 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 ELAC2Q9BQ52 826 aaKnown RBP9.53□□□□□ -0.88
SYN3-201ENST00000332840 TIMM29Q9BSF4 260 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.53□□□□□ -0.88
SYN3-201ENST00000332840 EPB41L1Q9H4G0 881 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 NMRAL1Q9HBL8 299 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 SARS2Q9NP81 518 aaKnown RBP9.53□□□□□ -0.88
SYN3-201ENST00000332840 IL26Q9NPH9 171 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 SPATS2LQ9NUQ6 558 aaKnown RBP9.53□□□□□ -0.88
SYN3-201ENST00000332840 ZNF358Q9NW07 568 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 ATXN10Q9UBB4 475 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 OAS3Q9Y6K5 1087 aaKnown RBP9.53□□□□□ -0.88
SYN3-201ENST00000332840 RNF215Q9Y6U7 377 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 SCN8AQ9UQD0 1980 aa9.53□□□□□ -0.88
SYN3-201ENST00000332840 A0A087WV48 116 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 TRBV5-4A0A0C4DH59 114 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 BRINP1O60477 761 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 SNX3O60493 162 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PRAMEF1O95521 474 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 LTA4HP09960 611 aaKnown RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 RALBP11234 206 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 F3P13726 295 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PKMP14618 531 aaKnown RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 CPA3P15088 417 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ZNF7P17097 686 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 ZNF8P17098 575 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 BGNP21810 368 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 CD9P21926 228 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 FDXRP22570 491 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 FMO4P31512 558 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PRKAA2P54646 552 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ADARP55265 1226 aaKnown RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 STX3Q13277 289 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 CHI3L2Q15782 390 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 TBC1D25Q3MII6 688 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ATP13A5Q4VNC0 1218 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 KLC3Q6P597 504 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ZNF549Q6P9A3 640 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 FAM151BQ6UXP7 276 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 LRRC69Q6ZNQ3 347 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ADGRG6Q86SQ4 1221 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 SLC9B2Q86UD5 537 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PIM3Q86V86 326 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 TRAPPC5Q8IUR0 188 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 RBM12BQ8IXT5 1001 aaKnown RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 PIANPQ8IYJ0 282 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 CENPLQ8N0S6 344 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 NAGSQ8N159 534 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 SFRP1Q8N474 314 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ANKS4BQ8N8V4 417 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 Q8N9G6 341 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 CCDC197Q8NCU1 140 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 DDHD1Q8NEL9 900 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 OR10G6Q8NH81 332 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ZNF398Q8TD17 642 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 FGF11Q92914 225 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ULK4Q96C45 1275 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 NXNL1Q96CM4 212 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 SEC16BQ96JE7 1060 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 OLFM1Q99784 485 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PLCD4Q9BRC7 762 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 MECRQ9BV79 373 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 TSSK1BQ9BXA7 367 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ZNF106Q9H2Y7 1883 aaKnown RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 FAM96AQ9H5X1 160 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ASB8Q9H765 288 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 SYTL2Q9HCH5 934 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 GPAMQ9HCL2 828 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 TAS2R13Q9NYV9 303 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 COPG2Q9UBF2 871 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 PCDHB1Q9Y5F3 818 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ENTPD2Q9Y5L3 495 aa9.52□□□□□ -0.89
SYN3-201ENST00000332840 ARID1BQ8NFD5 2236 aaPredicted RBP9.52□□□□□ -0.89
SYN3-201ENST00000332840 A0A1W2PQM1 296 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 ERICH4A6NGS2 130 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 CYSRT1A8MQ03 144 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 GAPDHSO14556 408 aaPredicted RBP9.51□□□□□ -0.89
SYN3-201ENST00000332840 PRMT5O14744 637 aaPredicted RBP9.51□□□□□ -0.89
SYN3-201ENST00000332840 PLD2O14939 933 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
SYN3-201ENST00000332840 DUX1O43812 170 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 H2AFYO75367 372 aaKnown RBP9.51□□□□□ -0.89
SYN3-201ENST00000332840 VPS26AO75436 327 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 WISP3O95389 354 aaPredicted RBP9.51□□□□□ -0.89
SYN3-201ENST00000332840 ESR1P03372 595 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 SERPINE1P05121 402 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 RBP1P09455 135 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 CCDC166P0CW27 439 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 TROVE2P10155 538 aaKnown RBP eCLIP9.51□□□□□ -0.89
SYN3-201ENST00000332840 MYL2P10916 166 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 MSH3P20585 1137 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 RPS3P23396 243 aaKnown RBP eCLIP9.51□□□□□ -0.89
SYN3-201ENST00000332840 GRK2P25098 689 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 ALDH4A1P30038 563 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 GMPRP36959 345 aa9.51□□□□□ -0.89
SYN3-201ENST00000332840 CDKN1CP49918 316 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms