RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 F7P08709 466 aaPredicted RBP13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CHRM5P08912 532 aaPredicted RBP13.57□□□□□ -0.24
LIMS1-201ENST00000332345 GSTA2P09210 222 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CD9P21926 228 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 ABCG1P45844 678 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 KIR2DS3Q14952 304 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 TRADDQ15628 312 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 LRRC8EQ6NSJ5 796 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CEP128Q6ZU80 1094 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CYS1Q717R9 158 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 SLC26A11Q86WA9 606 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CCDC25Q86WR0 208 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 D2HGDHQ8N465 521 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 SEC14L1Q92503 715 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CDKL2Q92772 493 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 OR6C1Q96RD1 312 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 GPR21Q99679 349 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CTRCQ99895 268 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 RAB11FIP5Q9BXF6 653 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 TSPYL1Q9H0U9 437 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 SIDT1Q9NXL6 827 aaKnown RBP13.57□□□□□ -0.24
LIMS1-201ENST00000332345 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 PLAGL1Q9UM63 463 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 MED16Q9Y2X0 877 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 VWA7Q9Y334 891 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 NFS1Q9Y697 457 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ISM1B1AKI9 464 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.56□□□□□ -0.24
LIMS1-201ENST00000332345 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ZBTB14O43829 449 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 CATP04040 527 aaKnown RBP13.56□□□□□ -0.24
LIMS1-201ENST00000332345 MPC1LP0DKB6 136 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 LIPCP11150 499 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 MAP4P27816 1152 aaKnown RBP13.56□□□□□ -0.24
LIMS1-201ENST00000332345 PKLRP30613 574 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SSTR1P30872 391 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 MAGEA4P43358 317 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 RGS4P49798 205 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 UCNP55089 124 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SH3BP2P78314 561 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SPESP1Q6UW49 350 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ZFAND4Q86XD8 727 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 PPP1R3BQ86XI6 285 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 RASGRP3Q8IV61 690 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SPACA3Q8IXA5 215 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 OR2L8Q8NGY9 312 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 OR8K5Q8NH50 307 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 CD200R1Q8TD46 325 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ASB11Q8WXH4 323 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 OR2A14Q96R47 310 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 NDNQ99608 321 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SLC30A3Q99726 388 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 NRTNQ99748 197 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 PITPNM3Q9BZ71 974 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SYTL2Q9HCH5 934 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 APMAPQ9HDC9 416 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 SOHLH2Q9NX45 425 aa13.56□□□□□ -0.24
LIMS1-201ENST00000332345 TSR3Q9UJK0 312 aaKnown RBP13.56□□□□□ -0.24
LIMS1-201ENST00000332345 ESYT3A0FGR9 886 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 PSIP1O75475 530 aaKnown RBP13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FGF5P12034 268 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FOLR1P15328 257 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 UGT2B7P16662 529 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 MCM3P25205 808 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 ITPKBP27987 946 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 HSD17B2P37059 387 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 TUBB4BP68371 445 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 TLE3Q04726 772 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 CLN3Q13286 438 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 TUBB3Q13509 450 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 CUL1Q13616 776 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 GRB7Q14451 532 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FAM45BPQ6NSW5 357 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 CYHR1Q6ZMK1 362 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 DTX1Q86Y01 620 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 GPATCH11Q8N954 259 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 NOA1Q8NC60 698 aaKnown RBP13.55□□□□□ -0.24
LIMS1-201ENST00000332345 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 GIMAP7Q8NHV1 300 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FAM45AQ8TCE6 357 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 PMEPA1Q969W9 287 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FCRL4Q96PJ5 515 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FANCEQ9HB96 536 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 FGF21Q9NSA1 209 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 SPHK1Q9NYA1 384 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 TXNDC16Q9P2K2 825 aa13.55□□□□□ -0.24
LIMS1-201ENST00000332345 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
LIMS1-201ENST00000332345 RARRES3Q9UL19 164 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms