RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 CATP04040 527 aaKnown RBP17.42■□□□□ 0.38
ACTB-201ENST00000331789 NEK2P51955 445 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 KCNK10P57789 538 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 DOK6Q6PKX4 331 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 CYP20A1Q6UW02 462 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 RNF165Q6ZSG1 346 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 CCDC138Q96M89 665 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 INTS7Q9NVH2 962 aaKnown RBP17.42■□□□□ 0.38
ACTB-201ENST00000331789 TMEM181Q9P2C4 612 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 STOX2Q9P2F5 926 aaPredicted RBP17.42■□□□□ 0.38
ACTB-201ENST00000331789 EPS15L1Q9UBC2 864 aa17.42■□□□□ 0.38
ACTB-201ENST00000331789 A0A1W2PP18 115 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 LIN7AO14910 233 aaPredicted RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 ADH1BP00325 375 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 C5AR1P21730 350 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 RPS14P62263 151 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 RPL38P63173 70 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 RCAN2Q14206 197 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 FLOT2Q14254 428 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 WSCD2Q2TBF2 565 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 AGTRAPQ6RW13 159 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 ADAMTSL4Q6UY14 1074 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 RNF111Q6ZNA4 994 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 KBTBD6Q86V97 674 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 THOC6Q86W42 341 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 L3MBTL4Q8NA19 623 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 PPFIBP2Q8ND30 876 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 COX14Q96I36 57 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 FOPNLQ96NB1 174 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 GPATCH1Q9BRR8 931 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 SLC6A17Q9H1V8 727 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 SPAG4Q9NPE6 437 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 GMPR2Q9P2T1 348 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 FAM234BA2RU67 622 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 PRORSD1PA6NEY8 169 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 ANHXE9PGG2 379 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 ACOT8O14734 319 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 MAP3K7O43318 606 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 AP1G1O43747 822 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 VEGFDO43915 354 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 RNASEH2AO75792 299 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 KRT6AP02538 564 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 KRT6BP04259 564 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 BMP8BP34820 402 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 VHLP40337 213 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 HALP42357 657 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 KRT6CP48668 564 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 SLC7A2P52569 658 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 YBX1P67809 324 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 NAE1Q13564 534 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 CAPRIN1Q14444 709 aaKnown RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 IMPG1Q17R60 797 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 BHLHE22Q8NFJ8 381 aaPredicted RBP17.41■□□□□ 0.38
ACTB-201ENST00000331789 TSPEARQ8WU66 669 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 KLK6Q92876 244 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 MED8Q96G25 268 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 LGR4Q9BXB1 951 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 CD300AQ9UGN4 299 aa17.41■□□□□ 0.38
ACTB-201ENST00000331789 CCDC154A6NI56 674 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 SEC22BO75396 215 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 BCAS2O75934 225 aaPredicted RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 RSL1D1O76021 490 aaKnown RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 C1orf105O95561 183 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 GNPDA1P46926 289 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 CHIT1Q13231 466 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 NFE2L1Q14494 772 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 TLR1Q15399 786 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 GGTA1PQ4G0N0 100 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 PAGE3Q5JUK9 113 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 ZNF776Q68DI1 518 aaPredicted RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 FAM83HQ6ZRV2 1179 aaPredicted RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 C11orf96Q7Z7L8 435 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 SELENOMQ8WWX9 145 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 ATL1Q8WXF7 558 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 ZNF514Q96K75 400 aaPredicted RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 LINC00615Q96LM1 132 aaPredicted RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 ACPTQ9BZG2 426 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 PCDHAC1Q9H158 963 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 LRTM1Q9HBL6 345 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 MBNL1Q9NR56 388 aaKnown RBP17.4■□□□□ 0.38
ACTB-201ENST00000331789 GPR34Q9UPC5 381 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 MTCH2Q9Y6C9 303 aa17.4■□□□□ 0.38
ACTB-201ENST00000331789 H3BNX3 289 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 FXYD1O00168 92 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 ANKRD28O15084 1053 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 SLC16A8O95907 504 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 EGFP01133 1207 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 IMPA1P29218 277 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 PON2Q15165 354 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 TIGD2Q4W5G0 525 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 COQ5Q5HYK3 327 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
ACTB-201ENST00000331789 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 OR2T3Q8NH03 318 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 OR2L2Q8NH16 312 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 GANCQ8TET4 914 aa17.39■□□□□ 0.37
ACTB-201ENST00000331789 LRRC58Q96CX6 371 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms