RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 OR12D3Q9UGF7 316 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 ATPIF1Q9UII2 106 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 FAM234BA2RU67 622 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 I6L893 689 aaPredicted RBP17.78■□□□□ 0.44
PKP3-201ENST00000331563 STAU1O95793 577 aaKnown RBP17.78■□□□□ 0.44
PKP3-201ENST00000331563 POMCP01189 267 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 SCNN1GP51170 649 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 DGKQP52824 942 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 IL18R1Q13478 541 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 PLA2G4EQ3MJ16 856 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 MFSD14CQ5VZR4 134 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 SDE2Q6IQ49 451 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 UNC93AQ86WB7 457 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 HORMAD1Q86X24 394 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 OR10Q1Q8NGQ4 319 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 FAM124BQ9H5Z6 455 aaPredicted RBP17.78■□□□□ 0.44
PKP3-201ENST00000331563 FBXL12Q9NXK8 326 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 MAT2BQ9NZL9 334 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.78■□□□□ 0.44
PKP3-201ENST00000331563 NCF1BA6NI72 391 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 NCF1CA8MVU1 366 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 F8W810 466 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 M0QZ92 97 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 PRKAR2AP13861 404 aaKnown RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 NCF1P14598 390 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 ZNF37AP17032 561 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 RAD51Q06609 339 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 SREBF2Q12772 1141 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 LCP2Q13094 533 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 RFX4Q33E94 735 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 DCBLD1Q8N8Z6 715 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 RNF34Q969K3 372 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 PRKD2Q9BZL6 878 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 GLOD4Q9HC38 313 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 FAM105AQ9NUU6 356 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 TAS2R9Q9NYW1 312 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 DERAQ9Y315 318 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 CLDN24A6NM45 220 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 H3BUI4 141 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 TFECO14948 347 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 SLC16A6O15403 523 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 RECQL5O94762 991 aaPredicted RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 CFL1P23528 166 aaKnown RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 ZFP36L2P47974 494 aaKnown RBP17.77■□□□□ 0.44
PKP3-201ENST00000331563 GEMP55040 296 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 OR4D1Q15615 310 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 BCL7AQ4VC05 210 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 UBQLNLQ8IYU4 475 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 ATPAF2Q8N5M1 289 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 SLC38A4Q969I6 547 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 CEP19Q96LK0 163 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 GDF15Q99988 308 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 ITPAQ9BY32 194 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 ACOXLQ9NUZ1 547 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 ERVK13-1Q9NX77 482 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 VPS4AQ9UN37 437 aa17.77■□□□□ 0.44
PKP3-201ENST00000331563 KCNJ13O60928 360 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 GADD45AP24522 165 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 NFKB2Q00653 900 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 MVKQ03426 396 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 RBBP7Q16576 425 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
PKP3-201ENST00000331563 KIAA1958Q8N8K9 716 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 TMEM209Q96SK2 561 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 TMEFF2Q9UIK5 374 aaPredicted RBP17.76■□□□□ 0.43
PKP3-201ENST00000331563 LOC110117498-PIK3R3F6TDL0 507 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 CD1DP15813 335 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 PRDX3P30048 256 aaKnown RBP17.76■□□□□ 0.43
PKP3-201ENST00000331563 HOXC8P31273 242 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 TGFBR2P37173 567 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 LIPAP38571 399 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 SLC15A1P46059 708 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 DSTNP60981 165 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 FADDQ13158 208 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 GTF2H3Q13889 308 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 C5orf22Q49AR2 442 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 NDUFAF5Q5TEU4 345 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 LAIR1Q6GTX8 287 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 ZNF517Q6ZMY9 492 aaPredicted RBP17.76■□□□□ 0.43
PKP3-201ENST00000331563 PROKR1Q8TCW9 393 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 CYP2S1Q96SQ9 504 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 PHOX2BQ99453 314 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 RNF6Q9Y252 685 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 Q9Y3F1 56 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 OR51F1A6NGY5 319 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 PDPK1O15530 556 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 EPN2O95208 641 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 NPPAP01160 153 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 YES1P07947 543 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 KCNE1P15382 129 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 ESCO2Q56NI9 601 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 DLEU7Q6UYE1 221 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 NRARPQ7Z6K4 114 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 CILP2Q8IUL8 1156 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 TCAIMQ8N3R3 496 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 FBXO39Q8N4B4 442 aa17.76■□□□□ 0.43
PKP3-201ENST00000331563 B3GALNT2Q8NCR0 500 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms