RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MT-ND3P03897 115 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 SLC35G4P0C7Q5 338 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CD8BP10966 210 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CCL4P13236 92 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 HGFP14210 728 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 AMD1P17707 334 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NELFEP18615 380 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 ADRA1DP25100 572 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 MC4RP32245 332 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 FOXN2P32314 431 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NTF4P34130 210 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NSG1P42857 185 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 MAPK10P53779 464 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CCZ1BP86790 482 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CCZ1P86791 482 aaPredicted RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 MC1RQ01726 317 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 SIX1Q15475 284 aaPredicted RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 KIF26BQ2KJY2 2108 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 AARS2Q5JTZ9 985 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 ZNF648Q5T619 568 aaPredicted RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 NKAIN2Q5VXU1 208 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 AFTPHQ6ULP2 937 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NLGN4XQ8N0W4 816 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 MPP5Q8N3R9 675 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ESX1Q8N693 406 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ACVR1CQ8NER5 493 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NLGN4YQ8NFZ3 816 aaPredicted RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 OR13C4Q8NGS5 318 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 SEC14L1Q92503 715 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ART4Q93070 314 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 NKD1Q969G9 470 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CDKN2AIPNLQ96HQ2 116 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 SLC45A3Q96JT2 553 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 DNAJC1Q96KC8 554 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 TBC1D10AQ9BXI6 508 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CHRNA10Q9GZZ6 450 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ADNPQ9H2P0 1102 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 C10orf88Q9H8K7 445 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 MRM3Q9HC36 420 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 CPNE5Q9HCH3 593 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ARFGAP3Q9NP61 516 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CASS4Q9NQ75 786 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 MBNL3Q9NUK0 354 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 TMEM9Q9P0T7 183 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 PILRAQ9UKJ1 303 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 ZNF148Q9UQR1 794 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 BTRCQ9Y297 605 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 DNAJC16Q9Y2G8 782 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 WDR37Q9Y2I8 494 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 PCDHGA6Q9Y5G7 932 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 B3GALT1Q9Y5Z6 326 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 A0A0U1RQJ8 604 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 OR2AG2A6NM03 316 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 ZNF891A8MT65 544 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 CES2O00748 559 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 POLR1CO15160 346 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 RAD1O60671 282 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 FKBP9O95302 570 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 RNASE1P07998 156 aaKnown RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 ATF4P18848 351 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 TPSB2P20231 275 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 RPL10P27635 214 aaKnown RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 MAGEA6P43360 314 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 NPY2RP49146 381 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 ACY1Q03154 408 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 NFE2L1Q14494 772 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 TPSAB1Q15661 275 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 FNBP1LQ5T0N5 605 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 TSTD2Q5T7W7 516 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 ARHGAP40Q5TG30 622 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 FAM83HQ6ZRV2 1179 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 SERPINA9Q86WD7 417 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 OOSP2Q86WS3 158 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 RASGEF1CQ8N431 466 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 D2HGDHQ8N465 521 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 CCDC89Q8N998 374 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 KIAA1143Q96AT1 154 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 MED8Q96G25 268 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 NAF1Q96HR8 494 aaKnown RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 PBKQ96KB5 322 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 BBC3Q96PG8 261 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 NAP1L3Q99457 506 aaPredicted RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 APOL2Q9BQE5 337 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 TSSK1BQ9BXA7 367 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 SLC12A9Q9BXP2 914 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 TLR10Q9BXR5 811 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 IL22Q9GZX6 179 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 OR52A5Q9H2C5 316 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 TFB2MQ9H5Q4 396 aaKnown RBP6.16□□□□□ -1.42
SMG1-201ENST00000330588 COG4Q9H9E3 785 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 PDE7BQ9NP56 450 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 OCIAD1Q9NX40 245 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 POLG2Q9UHN1 485 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 SLC24A2Q9UI40 661 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 ADAMTS6Q9UKP5 1117 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 KCTD3Q9Y597 815 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms