RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CYBRD1Q53TN4 286 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 RUNDC3AQ59EK9 446 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 GDPD4Q6W3E5 623 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TNIP2Q8NFZ5 429 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 OR2A12Q8NGT7 310 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 OR10A6Q8NH74 314 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 SELENOMQ8WWX9 145 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 THUMPD3Q9BV44 507 aaKnown RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 CARS2Q9HA77 564 aaKnown RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 PKD2L2Q9NZM6 624 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 DLGAP4Q9Y2H0 992 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TRBV5-3A0A0A0MS03 114 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 A0A1W2PQ67 120 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TRIM64A6NGJ6 449 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 WASH3PC4AMC7 463 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 EFCAB14O75071 495 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 SNAP29O95721 258 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 RPS14P62263 151 aaKnown RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 PHC1P78364 1004 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 GTDC1Q4AE62 458 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 PLEKHS1Q5SXH7 462 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TMEM214Q6NUQ4 689 aaKnown RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 DNAJC14Q6Y2X3 702 aaPredicted RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 ALDH16A1Q8IZ83 802 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 SKA2Q8WVK7 121 aaPredicted RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 MYLIPQ8WY64 445 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 FIG4Q92562 907 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 OR52E6Q96RD3 313 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 BBS2Q9BXC9 721 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TUBA8Q9NY65 449 aaPredicted RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 THEGQ9P2T0 379 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 MTCL1Q9Y4B5 1905 aaKnown RBP14.21□□□□□ -0.14
TPM3-206ENST00000330188 GFYI3L273 518 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 DEAF1O75398 565 aaPredicted RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 MTX2O75431 263 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 GMNNO75496 209 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 ADARB1P78563 741 aaKnown RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 CHRNB3Q05901 458 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 BOP1Q14137 746 aaKnown RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 PTCHD3Q3KNS1 767 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 NEK5Q6P3R8 708 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 ADIPOR2Q86V24 386 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 FAM86B1Q8N7N1 296 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 L3MBTL4Q8NA19 623 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 KLHL23Q8NBE8 558 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PYCR2Q96C36 320 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PAIP1Q9H074 479 aaKnown RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 SLC6A13Q9NSD5 602 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 SNX6Q9UNH7 406 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 A0A087WXM4 84 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 KRT87PA6NCN2 255 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 GSTA4O15217 222 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PRAMEF4O60810 478 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 MOSPD3O75425 235 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 SEC24DO94855 1032 aaPredicted RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 TIMP1P01033 207 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 HIST1H2AGP0C0S8 130 aaPredicted RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 HIST1H2ADP20671 130 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PRPH2P23942 346 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 SLC5A2P31639 672 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 HNMTP50135 292 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 CLDN8P56748 225 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 POLR2LP62875 67 aaKnown RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 SP140Q13342 867 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 NKG7Q16617 165 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PRAMEF9Q5VWM5 478 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 ENPP6Q6UWR7 440 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 USP51Q70EK9 711 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PATL1Q86TB9 770 aaKnown RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 PLPP6Q8IY26 295 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 OFCC1Q8IZS5 231 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 IRF7Q92985 503 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 TMBIM1Q969X1 311 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 HIST1H2AHQ96KK5 128 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 HIST1H2AJQ99878 128 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 P2RY13Q9BPV8 354 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 H2AFJQ9BTM1 129 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 UGT2B28Q9BY64 529 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 ELOVL6Q9H5J4 265 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 SOX17Q9H6I2 414 aaPredicted RBP14.2□□□□□ -0.14
TPM3-206ENST00000330188 ADGRE2Q9UHX3 823 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 PCDHGA11Q9Y5H2 935 aa14.2□□□□□ -0.14
TPM3-206ENST00000330188 ELOVL7A1L3X0 281 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 H0Y858 1186 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 SLC16A5O15375 505 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 SGTAO43765 313 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 PRPS2P11908 318 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 PCNAP12004 261 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 TYRP14679 529 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 ZNF30P17039 623 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 CYP2A7P20853 494 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 PCSK6P29122 969 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 VIPR1P32241 457 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 NEK2P51955 445 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 HTRA3P83110 453 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 TEAD2Q15562 447 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms