RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MICU2Q8IYU8 434 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 FNDC8Q8TC99 324 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 EGLN2Q96KS0 407 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 AMBRA1Q9C0C7 1298 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 BCL10O95999 233 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 PDYNP01213 254 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ANXA5P08758 320 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 DCKP27707 260 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 AP1S1P61966 158 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 KIAA0040Q15053 153 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TMEM179BQ7Z7N9 219 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 GPR26Q8NDV2 337 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 OVCA2Q8WZ82 227 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 EBPLQ9BY08 206 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ATG10Q9H0Y0 220 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 NEUROG3Q9Y4Z2 214 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 CLDN9O95484 217 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 IL6P05231 212 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 GJA1P17302 382 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 C21orf59P57076 290 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 CYP4F8P98187 520 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 IL5RAQ01344 420 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 EID3Q8N140 333 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 PNPT1Q8TCS8 783 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 SH3GL1Q99961 368 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 ACPTQ9BZG2 426 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 SNX5Q9Y5X3 404 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 MITFO75030 526 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 XYLBO75191 536 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 WDR47O94967 919 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 FTH1P02794 183 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 PSMA3P25788 255 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 SPAM1P38567 509 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 PHC1P78364 1004 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 CD47Q08722 323 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 NFATC3Q12968 1075 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 ATP1A4Q13733 1029 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 GPRC6AQ5T6X5 926 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 CES5AQ6NT32 575 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 DUS1LQ6P1R4 473 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 UBE2R2Q712K3 238 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 ZSWIM9Q86XI8 627 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF420Q8TAQ5 688 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 DEFB118Q96PH6 123 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 PDE10AQ9Y233 779 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 XPNPEP2O43895 674 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 C1QCP02747 245 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 CRHBPP24387 322 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■■□□ 18.5
ATP2C1-201ENST00000328560 RBM23Q86U06 439 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 NXPE1Q8N323 547 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 TBC1D15Q8TC07 691 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 HHIPL1Q96JK4 782 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 TRIM17Q9Y577 477 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 ORC6Q9Y5N6 252 aa13.72□□□□□ -0.21
ATP2C1-201ENST00000328560 C16orf96A6NNT2 1141 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 PFKLP17858 780 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 HALP42357 657 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 CDKN2CP42773 168 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 RUNDC3AQ59EK9 446 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 C6orf141Q5SZD1 244 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 GALNT18Q6P9A2 607 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 DOK6Q6PKX4 331 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 PRR23BQ6ZRT6 265 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 AADATQ8N5Z0 425 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 DCAF4L2Q8NA75 395 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 CNIH3Q8TBE1 160 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 BBS2Q9BXC9 721 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 GORASP2Q9H8Y8 452 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 DOLKQ9UPQ8 538 aa13.71□□□□□ -0.21
ATP2C1-201ENST00000328560 TRIM64A6NGJ6 449 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 AREL1O15033 823 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 EBLN1P0CF75 366 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 CTSOP43234 321 aaPredicted RBP13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 PHEXP78562 749 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 FXNQ16595 210 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 CTU2Q2VPK5 515 aaKnown RBP13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 ATP13A5Q4VNC0 1218 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms